Hi Andreas, yes, just use –p0 and no peptides will be filtered. i.e. don’t set the threshold to “near zero”, set it to zero.
Eric *From:* [email protected] [mailto: [email protected]] *On Behalf Of * [email protected] *Sent:* Monday, April 20, 2015 11:54 PM *To:* [email protected] *Subject:* [spctools-discuss] pep probability near to zero Dear all, we are trying to filter a dataset according to Xcorr values but we are constantly failing in doing so for a subset of peptides that do have Xcorr values that are satisfying our tresholds but do have such small probabilities after xinteract that even if we set the treshold to near zero, these peptides are still filtered out automatically. Is there an option for completely neglecting the probs for these peptides? best Andreas -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at http://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout. -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at http://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout.
