Hi, I am running comet database search for my 15 fraction of mzXML data file from WATERS QTOP. Out of 15 fractions only 5 fractions command are success, remaining fraction has the following error
*EXECUTING: cd c:/Inetpub/wwwroot/ISB/data& c:\Inetpub\tpp-bin\comet -Pc:/Inetpub/wwwroot/ISB/data/parameters/comet.params -Nc:/Inetpub/wwwroot/ISB/data/parameters/17052016_NISHAD_ITRAQ_1 -Dc:/Inetpub/wwwroot/ISB/data/parameters/Chicken.fa 17052016_NISHAD_ITRAQ_1.mzXML * Warning - invalid parameter found: precursor_tolerance_type. Parameter will be ignored. Warning - invalid parameter found: require_variable_mod. Parameter will be ignored. Warning - invalid parameter found: mass_offsets. Parameter will be ignored. Warning - invalid parameter found: add_U_selenocysteine. Parameter will be ignored. Comet version "2014.02 rev. 2" Search start: 06/12/2016, 11:21:12 PM - Input file: 17052016_NISHAD_ITRAQ_1.mzXML - Load and process input spectra *Command FAILED* RETURN CODE:65280 Kindly help some one what could be the reason?how can i solve this problem? -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at https://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout.
