Hi Alejandro, which checkout did you do? Was it this?
svn checkout -r 7909 http://svn.code.sf.net/p/sashimi/code/trunk/trans_proteomic_pipeline Or a little different? Thanks, Eric *From:* [email protected] <[email protected]> *On Behalf Of *Alejandro *Sent:* Friday, May 17, 2019 2:57 PM *To:* spctools-discuss <[email protected]> *Subject:* [spctools-discuss] TPP 5.2 compile error Ubuntu 18.04 Hello all, Im trying to install TPP 5.2 on a computer running Ubuntu 18.04. I'm following the guide but so far I have been unsuccessful. I just changed the username and kept the tpp group. The install location is as is in the guide, and the /dat would be different. After running make all As per the guide I tried to run again (make all) but always throws the same error. I get the following error:; *~/svn/trans_proteomic_pipeline$ make all* g++ -g -std=c++11 -Wno-deprecated -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DTPPLIB -I/home/laptop/svn/trans_proteomic_pipeline/src -I/home/laptop/svn/trans_proteomic_pipeline/build/gnu-x86_64/include -D__LINUX__ -fPIC -MMD -c -o /home/laptop/svn/trans_proteomic_pipeline/build/gnu-x86_64/artifacts/Parsers/mzParser/saxmzmlhandler.o /home/laptop/svn/trans_proteomic_pipeline/src/Parsers/mzParser/saxmzmlhandler.cpp /home/laptop/svn/trans_proteomic_pipeline/src/Parsers/mzParser/saxmzmlhandler.cpp:571:58: error: no ‘bool mzpSAXMzmlHandler::readHeaderFromOffset(f_off)’ member function declared in class ‘mzpSAXMzmlHandler’ bool mzpSAXMzmlHandler::readHeaderFromOffset(f_off offset){ ^ /home/laptop/svn/trans_proteomic_pipeline/src/Parsers/mzParser/saxmzmlhandler.cpp:633:60: error: no ‘bool mzpSAXMzmlHandler::readSpectrumFromOffset(f_off)’ member function declared in class ‘mzpSAXMzmlHandler’ bool mzpSAXMzmlHandler::readSpectrumFromOffset(f_off offset){ ^ /home/laptop/svn/trans_proteomic_pipeline/src/Parsers/Makefile:87: recipe for target '/home/laptop/svn/trans_proteomic_pipeline/build/gnu-x86_64/artifacts/Parsers/mzParser/saxmzmlhandler.o' failed make: *** [/home/laptop/svn/trans_proteomic_pipeline/build/gnu-x86_64/artifacts/Parsers/mzParser/saxmzmlhandler.o] Error 1 The "^" sign is bellow the closing parenthesis on (f_off offset) and on my terminal is highlighted in red I really don't know how to troubleshoot this. Any help would be appreciated. Alejandro -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at https://groups.google.com/group/spctools-discuss. To view this discussion on the web visit https://groups.google.com/d/msgid/spctools-discuss/e9e10909-7716-4f46-accd-42e4fd33f010%40googlegroups.com <https://groups.google.com/d/msgid/spctools-discuss/e9e10909-7716-4f46-accd-42e4fd33f010%40googlegroups.com?utm_medium=email&utm_source=footer> . For more options, visit https://groups.google.com/d/optout. -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at https://groups.google.com/group/spctools-discuss. To view this discussion on the web visit https://groups.google.com/d/msgid/spctools-discuss/44f229a8b52e46bcabd36278c795b275%40mail.gmail.com. For more options, visit https://groups.google.com/d/optout.
