Hello and welcome! You are correct! That is the model-estimated error/sensitivity table for ProteinProphet, in this case. A table of this sort is generated for PeptideProphet model estimates, iProphet based model estimates or ProteinProphet model estimates depending on the file being considered.
Cheers, -David On Mon, Jul 27, 2020 at 9:41 AM RS <[email protected]> wrote: > I'm new to TPP and trying to find the the probabilty correspnding to the > Target FDR of 1% > > Do I need to find it out from the following table? The probability > corresponds 0.74 corresponds to 1% FDR? > > > ProteinProphet Table <https://i.ibb.co/y8RZrxq/Pepprophet-model-FDR.png> > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To view this discussion on the web visit > https://groups.google.com/d/msgid/spctools-discuss/d830a6da-de28-4e50-8b00-acf1e4f43205n%40googlegroups.com > <https://groups.google.com/d/msgid/spctools-discuss/d830a6da-de28-4e50-8b00-acf1e4f43205n%40googlegroups.com?utm_medium=email&utm_source=footer> > . > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To view this discussion on the web visit https://groups.google.com/d/msgid/spctools-discuss/CAGJJY%3D-PCEozae1FpL9U2YujK4P-3O0hTWi-WO9Ea9aSRNcMgg%40mail.gmail.com.
