Hi, 
     I am using RefSeq database which has isoforms. My pipeline includes 
Mascot, peptide prophet, iProphet and spectraST.
In the spectraST output .sptxt file, for some spectra there are multiple 
proteins identified. 
eg. 
Protein=4/NP_001448.2|gn|FLNB:2317|/NP_001157791.1|gn|FLNB:2317|/NP_001449.3|gn|FLNC:2318|/NP_001447.2|gn|FLNA:2316|

Is there a way to select only top match protein?

Thanks!

Best regards,
Shubham

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