Dear members, I am new to this group. Can anyone help me get a standard refined search parameters either in comet or tandem or in any other search engine to identify endogenous peptides. 1. These peptides have not been cleaved by any enzyme 2. Modification are typically not as those which happen during trypsin digestion. 3. Is FDR <1% in decoy search good in this case?
Please reply if you have any clues. Reg, sud -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to spctools-discuss+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/spctools-discuss/2789dfd2-297a-4981-8233-70c799f96e77n%40googlegroups.com.
