Can i get the parameter list for Tandem search? With regards Anju Nagpal PhD Scholar Animal Biotechnology Centre National Dairy Research Institute, Karnal
On Tue, 26 Jul 2022, 11:01 am 'Eric Deutsch' via spctools-discuss, < [email protected]> wrote: > Correct, if you did not use iodoacetamide, then change it to 0.0 > > > > > > *From:* [email protected] < > [email protected]> *On Behalf Of *Anju Nagpal > *Sent:* Monday, July 25, 2022 9:35 PM > *To:* [email protected] > *Subject:* Re: [spctools-discuss] Comet parameters > > > > What if my experiment does not include any alkylation step? > > Do I need to change it to 0? > > > > On Mon, Jul 25, 2022 at 8:26 PM 'Eric Deutsch' via spctools-discuss < > [email protected]> wrote: > > Since Cys is almost always alkylated with iodoacetamide in most > experiments: > > > > http://www.unimod.org/modifications_view.php?editid1=4 > > > > > > *From:* [email protected] < > [email protected]> *On Behalf Of *Anju Nagpal > *Sent:* Monday, July 25, 2022 1:59 AM > *To:* spctools-discuss <[email protected]> > *Subject:* [spctools-discuss] Comet parameters > > > > Hi, > > Why is a default value of 57.021464 is added for cysteine in comet > parameter? > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To view this discussion on the web visit > https://groups.google.com/d/msgid/spctools-discuss/45a5655b-90fc-4625-9f1f-c0a30cd76d61n%40googlegroups.com > <https://groups.google.com/d/msgid/spctools-discuss/45a5655b-90fc-4625-9f1f-c0a30cd76d61n%40googlegroups.com?utm_medium=email&utm_source=footer> > . > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To view this discussion on the web visit > https://groups.google.com/d/msgid/spctools-discuss/bc653a0509e08caa926caf3dde321387%40mail.gmail.com > <https://groups.google.com/d/msgid/spctools-discuss/bc653a0509e08caa926caf3dde321387%40mail.gmail.com?utm_medium=email&utm_source=footer> > . > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To view this discussion on the web visit > https://groups.google.com/d/msgid/spctools-discuss/CAHwL-OVKmd1%2Bd49-GvW8t0f62uJVNvkjpV%2B-dcFxvXdOd9Mk1g%40mail.gmail.com > <https://groups.google.com/d/msgid/spctools-discuss/CAHwL-OVKmd1%2Bd49-GvW8t0f62uJVNvkjpV%2B-dcFxvXdOd9Mk1g%40mail.gmail.com?utm_medium=email&utm_source=footer> > . > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To view this discussion on the web visit > https://groups.google.com/d/msgid/spctools-discuss/ddbbf9fd44038866975ee0bd47015830%40mail.gmail.com > <https://groups.google.com/d/msgid/spctools-discuss/ddbbf9fd44038866975ee0bd47015830%40mail.gmail.com?utm_medium=email&utm_source=footer> > . > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To view this discussion on the web visit https://groups.google.com/d/msgid/spctools-discuss/CAHwL-OV3_Ay3tZVtykfGjTA5Tt%3DKUN4OcpSBEtCgbHtM0HS-xQ%40mail.gmail.com.
