Sir I need to upload the file at the "MSFragger search" step in TPP. I tried using the link sent above but could not get one. It would be a great help if you could share the text file of the parameter. Thank you Priti PhD Scholar Animal Biotechnology Centre, NDRI Karnal
On Wed, Feb 22, 2023 at 10:05 AM 'Eric Deutsch' via spctools-discuss < [email protected]> wrote: > MSFragger itself can generate one for you, just run something like: > > > > /usr/bin/java -jar msfragger-3.2.one-jar.jar --config closed > > mv closed_fragger.params msfragger.params > > > > > > > > *From:* [email protected] < > [email protected]> *On Behalf Of *Priti Panchal > *Sent:* Tuesday, February 21, 2023 8:32 PM > *To:* [email protected] > *Subject:* [spctools-discuss] MSFragger param > > > > Hello all > > I need to run my file through the MSFragger pipeline in TPP. Can anyone > share an MSFragger param file with me? > > Thanks and Regards > > Priti > > PhD Scholar > > Animal Biotechnology Centre, NDRI > > Karnal > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To view this discussion on the web visit > https://groups.google.com/d/msgid/spctools-discuss/CANdSM59O81qiZHaU-L0_qQYzLr3O5Hi-bFCkMu_sH2Y6eWb%2B1Q%40mail.gmail.com > <https://groups.google.com/d/msgid/spctools-discuss/CANdSM59O81qiZHaU-L0_qQYzLr3O5Hi-bFCkMu_sH2Y6eWb%2B1Q%40mail.gmail.com?utm_medium=email&utm_source=footer> > . > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To view this discussion on the web visit > https://groups.google.com/d/msgid/spctools-discuss/17c1fad4b9a63b3ae0133e4872138a38%40mail.gmail.com > <https://groups.google.com/d/msgid/spctools-discuss/17c1fad4b9a63b3ae0133e4872138a38%40mail.gmail.com?utm_medium=email&utm_source=footer> > . > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To view this discussion on the web visit https://groups.google.com/d/msgid/spctools-discuss/CANdSM58xYvdZu-jDj%3D-XDyAodG9prcQPiwncn0dn%3DS532ZZKZA%40mail.gmail.com.
