The TPP has tools for extracting searchable fragments from DIA data that can be searched like any other DDA data. The tool is called DISCo and there is a tutorial available here:
http://www.tppms.org/tutorials/ Among the tutorials we offer you should be able to find “DIA Analysis.” Please report back with any questions, problems or accolades ;). Cheers! -David > On Jul 24, 2024, at 1:14 AM, [email protected] <[email protected]> > wrote: > > I am new to TPP. Is it possible to use TPP for SWATH data analysis? > If yes, could you please help with the workflow (step by step) > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected] > <mailto:[email protected]>. > To view this discussion on the web visit > https://groups.google.com/d/msgid/spctools-discuss/71f8af88-5023-4827-a3ac-6c6cb071fb77n%40googlegroups.com > > <https://groups.google.com/d/msgid/spctools-discuss/71f8af88-5023-4827-a3ac-6c6cb071fb77n%40googlegroups.com?utm_medium=email&utm_source=footer>. -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To view this discussion on the web visit https://groups.google.com/d/msgid/spctools-discuss/173DD249-7B58-41FA-9407-FFD71F05F2A7%40systemsbiology.org.
