Hi Dan,
II have created a new environment. It didn't work for me as you suggested.
I have created first a python 3 env and then install spdmetrics. I also had
to install kealib, since spdlib doesn't demand it.
I have tried to run spdmetrics from this new environment but I get the same
error: segemtation fault: [image: Imágenes integradas 1]
and here is the code (the xml I have already sent it to you):
#!/bin/bash
############# export Environment and GDAL_DRIVER_KEA #############
source activate /home/trashtos/anaconda/envs/spdtest
export
GDAL_DRIVER_PATH=~/anaconda/envs/spdtest/gdalplugins:$GDAL_DRIVER_PATH
export GDAL_DATA=~/anaconda/envs/spdtest/share/gdal:$GDAL_DATA
############# METRICS #############
spdmetrics --image -f KEA -b 1 -c 50 -r 50 -m
/media/trashtos/INTENSO/Ramiro_Masterarbeit/metrics2.xml -o
/media/trashtos/INTENSO/Ramiro_Masterarbeit/Tiles/Rows1/Cols29/als_dr_opt3_row1col29_2013_nztm_rmn_pmfmccgrd_10m_metrics.kea
-i
/media/trashtos/INTENSO/Ramiro_Masterarbeit/Tiles/Rows1/Cols29/als_dr_opt3_row1col29_2013_nztm_10m_rmn_pmfmccgrd_h.spd
###########################################
Thanks,
Ramiro
2015-02-09 22:18 GMT+01:00 Pete Bunting [pfb] <[email protected]>:
> Hi Ramiro,
>
> Can you let me know which flavour of Linux the machine which is failing
> to run spdlib has installed? Is it the same and your laptop? I assume they
> are both running 64bit linux versions?
>
> Many thanks,
>
> Pete
>
> ****************************************************
> * Dr Pete Bunting
> * Senior Lecturer in Remote Sensing
> * Earth Observation and Ecosystem Dynamics Group
> * Department of Geography and Earth Sciences
> * Aberystwyth University
> * Aberystwyth
> * Ceredigion
> * SY23 3DB
> * UK
> *
> * Ph: +44 (0) 1970 622615
> * Mob: +44 (0) 7917 842743
> * Email: [email protected]
> * ORCID: http://orcid.org/0000-0002-7435-0148
> ****************************************************
>
> On 9 Feb 2015, at 20:57, Daniel Clewley <[email protected]> wrote:
>
> Hi Ramiro,
>
> Didn’t think it would be that simple but good to get the obvious out of
> the way first.
>
> I take it you’re using Python 3 not 2 (we don’t keep the 2 builds as up
> to date). Creating a new conda environment is a good way to test. You can
> use:
>
> conda create -n spdtest spdlib
>
> To create a new conda environment with just SPDLib.
>
> If this doesn’t work you can try going back to an older version using:
>
> conda create -n spdtest spdlib=3.1.3
>
> Thanks,
>
> Dan
>
> On 9 Feb 2015, at 20:28, Ramiro Silveyra González <[email protected]>
> wrote:
>
> Hi Daniel,
>
> I have shorten the paths for the email. Input, output and XML file are
> written with full path. The command is part of sh script I have created
> with an adapted version of Pete's multi SPD tiles processing. Tile scripts
> are created by a Python script and then submitted to the CPU cores.
>
> It has worked previously without troubles on my laptop in both ways,
> single file processing and multiprocessing, exactly the same command with
> same files, so memory allocation shouldn't be a problem. Now it doesn't.
>
> On the big computer there is a newer installed version of anaconda, and
> there it has never work, no matter what script, input, output, XML file I
> submit to spdmetrics.
>
> I have noticed that depending on which order I installed packages with
> anaconda, spdlib fails to open files. However, I have tried to reinstall
> the packages but I didn't work out. My next idea is to create an anaconda
> environment for the spdlib and try to run the scripts from there, in case
> some packages dependencies were the source of the problem.
>
> Best,
>
> Ramiro
>
>
>
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