Hi Dan,
I have created the issue already.
https://bitbucket.org/petebunting/spdlib/issue/9/9-spd-metrics-command-seg-faults-when
Thanks,
Ramiro
2015-03-25 23:11 GMT+01:00 Daniel Clewley <daniel.clew...@gmail.com>:
> Hi Ramiro,
>
> If I pass in -b I can reproduce.
>
> Can you open an issue on Bitbucket for this problem.
>
> Thanks,
>
> Dan
>
> On 25 Mar 2015, at 21:16, Ramiro Silveyra González <rasil...@gmail.com>
> wrote:
>
> Hi Dan,
>
> I am running spdlib on Ubuntu 14.04, conda installation with a env for
> spdlib.
> But I think that you just gave me the solution. Thank you.
>
> If I run spdmetrics without specifying the bin size (b), as you did, the
> canopy cover metrics works.
> It was running this for my files:
> spdmetrics --image -f KEA -b 1 -c 50 -r 50 -m
> /media/INTENSO/Ramiro_Masterarbeit/CanopyCover1.xml -i
> /media/INTENSO/Ramiro_Masterarbeit/Tiles/Rows1/Cols30/tile_row1col30_2014_DHDNGK4_1m_rmn_pmfmccgrd_h.spd
> -o
> /media/INTENSO/Ramiro_Masterarbeit/Tiles/Rows1/Cols30/tile_row1col30_2014_DHDNGK4_rmn_pmfmccgrd_1m_CanopyCover.kea
>
> I tried everything on the xml template. But I did not think of not setting
> the resolution with -b.
> Without setting b, the metric works:
> spdmetrics --image -f KEA -c 50 -r 50 -m
> /media/INTENSO/Ramiro_Masterarbeit/CanopyCover1.xml -i
> /media/INTENSO/Ramiro_Masterarbeit/Tiles/Rows1/Cols30/tile_row1col30_2014_DHDNGK4_1m_rmn_pmfmccgrd_h.spd
> -o
> /media/INTENSO/Ramiro_Masterarbeit/Tiles/Rows1/Cols30/tile_row1col30_2014_DHDNGK4_rmn_pmfmccgrd_1m_CanopyCover.kea
>
> And now I have to questions:
> Is there a conflict if resolution is specified twice: command line and xml
> template?
> Is it better to specify the resolution just in the xml template?
>
> Thanks,
>
> Ramiro
>
>
> 2015-03-25 21:54 GMT+01:00 Daniel Clewley <daniel.clew...@gmail.com>:
>
>> Hi Ramiro,
>>
>> I’ve tried under running spdmetrics on OS X (built from source), Ubuntu
>> 14.04 and Fedora 21 using the latest build (SPDLib 3.2.289) from conda
>> (installed through Python 3.4 Miniconda) and all the metrics you sent ran
>> through fine so no idea why it’s not working on your system. The command I
>> used was:
>>
>> spdmetrics --image -f KEA -o test.kea -i subset_h.spd -m
>> CanopyPercent1.xml
>>
>> What distro are you running? Do you have other things installed which
>> could conflict with SPDLib? Have you tried under different systems and also
>> found the same problem?
>>
>> Thanks,
>>
>> Dan
>>
>> On 25 Mar 2015, at 18:07, Ramiro Silveyra González <rasil...@gmail.com>
>> wrote:
>>
>> ah, I forgot the xml templates.
>>
>> As I said all work but CanopyPercent. I have also tried canopycover and
>> it yields the same error.
>>
>> 2015-03-25 19:04 GMT+01:00 Ramiro Silveyra González <rasil...@gmail.com>:
>>
>>> Hi Dan,
>>>
>>> thanks for your answer.
>>> Yes, sure. You find a subset attached to this email.
>>>
>>> On this file (also on the subset) I run several metrics ('CoverRts',
>>> 'MeanH', 'MaxH', 'MedianH','MinH', 'SumH', 'VarH', 'StdH','Stratum6',
>>> 'Stratum5', 'Stratum4', 'Stratum3','Stratum2','hscoi',(....) 'MaxH_Last',
>>> 'MedianA', 'SumA' ).
>>> All of them work, but I cannot run anything based on canopycover.
>>> I have the same problem for the all files I have (504 tiles).
>>>
>>> It would be great if you can find out what is not working.
>>>
>>> Thanks,
>>>
>>> Ramiro
>>>
>>>
>>>
>>>
>>> 2015-03-23 14:35 GMT+01:00 Daniel Clewley <daniel.clew...@gmail.com>:
>>>
>>>> Hi Ramiro,
>>>>
>>>> Not sure on this error. If you can provide a small sample SPD file and
>>>> an example of a metrics file which works and one where it segfaults I can
>>>> try running it through a debugger and seeing if I can see anything.
>>>>
>>>> The SPDLib wiki is a bit out of date now, more up to date documentation
>>>> can be downloaded from
>>>> https://bitbucket.org/petebunting/spdlib-documentation or there are
>>>> tutorials available to download from
>>>> https://sourceforge.net/projects/spdlib/files/Tutorials/
>>>>
>>>> Thanks,
>>>>
>>>> Dan
>>>>
>>>> On 20 Mar 2015, at 20:49, Ramiro Silveyra González <rasil...@gmail.com>
>>>> wrote:
>>>>
>>>> Hi,
>>>>
>>>> I am running some metrics with spdmetrics.
>>>> Any metrics works fine for me, apart from metrics related to
>>>> canopycover.
>>>>
>>>> I tried with different parameters but I always get "segmentation fault,
>>>> core dumped.." error.
>>>> I have checked all examples in the spdlib wiki, but I do not see where
>>>> my template could be wrong.
>>>>
>>>> Here is my xml;
>>>>
>>>> <?xml version="1.0" encoding="UTF-8" ?>s
>>>> <!--
>>>> Description:
>>>> XML File for execution within SPDLib
>>>> This file contains a template for the
>>>> metrics XML interface.
>>>> -->
>>>>
>>>> <spdlib:metrics xmlns:spdlib="http://www.spdlib.org/xml/";>
>>>> <spdlib:metric metric="canopycover" field="CanopyCover"
>>>> resolution="1" radius="2" return="All" class="Grd" heightup="40"
>>>> heightlow="0" />
>>>> </spdlib:metrics>
>>>>
>>>> Thanks,
>>>>
>>>>
>>>> Ramiro
>>>>
>>>>
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>>>>
>>>
>> <CanopyPercent1.xml><CoverRts1.xml><hscoi.xml><MaxH1.xml><MaxH_First.xml>
>> <MaxH_Last.xml><MeanA.xml><MeanH1.xml><MedianA.xml><MedianH1.xml>
>> <MedianH_First.xml><MedianH_Last.xml><numPulses.xml><StdH.xml>
>> <Stratum2.xml><Stratum3.xml><Stratum4.xml><Stratum5.xml><Stratum6.xml>
>> <SumA.xml><SumH.xml><VarH.xml>
>>
>>
>>
>
>
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by Intel and developed in partnership with Slashdot Media, is your hub for all
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news, videos, case studies, tutorials and more. Take a look and join the
conversation now. http://goparallel.sourceforge.net/
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