If you want to ensure that table names remain constant in Windows and Linux 
and not have to worry about the case of table names (e.g., you develop on a 
Windows machine but your production server runs Linux), you can set 
lower_case_table_names to 1 in the global my.cnf config file (Linux):

http://dev.mysql.com/doc/refman/5.0/en/server-system-variables.html#sysvar_lower_case_table_names

For example:

[mysqld]
# ...
lower_case_table_names = 1
# ...

I had the exact same issue and setting this variable fixed it for me. My 
code worked fine in Windows but as soon as I put it on my production server, 
none of my tables could be found due to the Linux version of MySQL being 
case sensitive when it comes to table names.

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