Hi,
The PreLauncher worked, Taverna started up and the window shown,
but no component/activity shown in the panel.
What sort of dependencies should I have to put to my classpath?
My purpose is just to test my own activity on the Taverna platform.
In the eclipse console I got:
WARN 2009-07-15 17:08:28,998
(net.sf.taverna.raven.launcher.Launcher:190) - No splash screen : null
INFO 2009-07-15 17:08:33,307
(net.sf.taverna.t2.workbench.ui.impl.Workbench:425) - Using
com.sun.java.swing.plaf.windows.WindowsLookAndFeel Look and Feel
WARN 2009-07-15 17:08:34,623
(net.sf.taverna.raven.spi.SpiRegistry:85) - Could not find class
net.sf.taverna.t2.activities.biomoby.menu.BiomobyActivityDetailsMenuAction
using sun.misc.launcher$appclassloa...@18fe7c3
java.lang.ClassNotFoundException:
net.sf.taverna.t2.activities.biomoby.menu.BiomobyActivityDetailsMenuAction
at java.net.URLClassLoader$1.run(Unknown Source)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(Unknown Source)
at java.lang.ClassLoader.loadClass(Unknown Source)
at sun.misc.Launcher$AppClassLoader.loadClass(Unknown Source)
at java.lang.ClassLoader.loadClass(Unknown Source)
at
net.sf.taverna.raven.spi.SpiRegistry.updateRegistry(SpiRegistry.java:274)
at net.sf.taverna.raven.spi.SpiRegistry.getClasses(SpiRegistry.java:154)
at
net.sf.taverna.raven.spi.InstanceRegistry.getInstances(InstanceRegistry.java:129)
at net.sf.taverna.t2.spi.SPIRegistry.getInstances(SPIRegistry.java:117)
at
net.sf.taverna.t2.ui.menu.impl.MenuManagerImpl.findChildren(MenuManagerImpl.java:492)
at
net.sf.taverna.t2.ui.menu.impl.MenuManagerImpl.doUpdate(MenuManagerImpl.java:481)
at
net.sf.taverna.t2.ui.menu.impl.MenuManagerImpl.update(MenuManagerImpl.java:302)
at
net.sf.taverna.t2.ui.menu.impl.MenuManagerImpl.createToolBar(MenuManagerImpl.java:248)
at
net.sf.taverna.t2.ui.menu.impl.MenuManagerImpl.createToolBar(MenuManagerImpl.java:238)
at
net.sf.taverna.t2.workbench.ui.impl.Workbench.makeToolbarPanel(Workbench.java:220)
at
net.sf.taverna.t2.workbench.ui.impl.Workbench.makeGUI(Workbench.java:180)
at
net.sf.taverna.t2.workbench.ui.impl.Workbench.initialize(Workbench.java:235)
at
net.sf.taverna.t2.workbench.ui.impl.Workbench$1.run(Workbench.java:131)
at java.awt.event.InvocationEvent.dispatch(Unknown Source)
at java.awt.EventQueue.dispatchEvent(Unknown Source)
at java.awt.EventDispatchThread.pumpOneEventForFilters(Unknown Source)
at java.awt.EventDispatchThread.pumpEventsForFilter(Unknown Source)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown Source)
at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
at java.awt.EventDispatchThread.run(Unknown Source)
WARN 2009-07-15 17:08:34,638
(net.sf.taverna.raven.spi.SpiRegistry:85) - Could not find class
net.sf.taverna.t2.activities.biomoby.menu.BiomobyActivityParserMenuAction
using sun.misc.launcher$appclassloa...@18fe7c3
java.lang.ClassNotFoundException:
net.sf.taverna.t2.activities.biomoby.menu.BiomobyActivityParserMenuAction
at java.net.URLClassLoader$1.run(Unknown Source)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(Unknown Source)
at java.lang.ClassLoader.loadClass(Unknown Source)
at sun.misc.Launcher$AppClassLoader.loadClass(Unknown Source)
at java.lang.ClassLoader.loadClass(Unknown Source)
at
net.sf.taverna.raven.spi.SpiRegistry.updateRegistry(SpiRegistry.java:274)
at net.sf.taverna.raven.spi.SpiRegistry.getClasses(SpiRegistry.java:154)
at
net.sf.taverna.raven.spi.InstanceRegistry.getInstances(InstanceRegistry.java:129)
at net.sf.taverna.t2.spi.SPIRegistry.getInstances(SPIRegistry.java:117)
at
net.sf.taverna.t2.ui.menu.impl.MenuManagerImpl.findChildren(MenuManagerImpl.java:492)
at
net.sf.taverna.t2.ui.menu.impl.MenuManagerImpl.doUpdate(MenuManagerImpl.java:481)
at
net.sf.taverna.t2.ui.menu.impl.MenuManagerImpl.update(MenuManagerImpl.java:302)
at
net.sf.taverna.t2.ui.menu.impl.MenuManagerImpl.createToolBar(MenuManagerImpl.java:248)
at
net.sf.taverna.t2.ui.menu.impl.MenuManagerImpl.createToolBar(MenuManagerImpl.java:238)
at
net.sf.taverna.t2.workbench.ui.impl.Workbench.makeToolbarPanel(Workbench.java:220)
at
net.sf.taverna.t2.workbench.ui.impl.Workbench.makeGUI(Workbench.java:180)
at
net.sf.taverna.t2.workbench.ui.impl.Workbench.initialize(Workbench.java:235)
at
net.sf.taverna.t2.workbench.ui.impl.Workbench$1.run(Workbench.java:131)
at java.awt.event.InvocationEvent.dispatch(Unknown Source)
at java.awt.EventQueue.dispatchEvent(Unknown Source)
at java.awt.EventDispatchThread.pumpOneEventForFilters(Unknown Source)
at java.awt.EventDispatchThread.pumpEventsForFilter(Unknown Source)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown Source)
at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
at java.awt.EventDispatchThread.run(Unknown Source)
WARN 2009-07-15 17:08:34,654
(net.sf.taverna.raven.spi.SpiRegistry:85) - Could not find class
net.sf.taverna.t2.activities.biomoby.actions.BiomobyAdvancedMenuAction
using sun.misc.launcher$appclassloa...@18fe7c3
java.lang.ClassNotFoundException:
net.sf.taverna.t2.activities.biomoby.actions.BiomobyAdvancedMenuAction
at java.net.URLClassLoader$1.run(Unknown Source)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(Unknown Source)
at java.lang.ClassLoader.loadClass(Unknown Source)
at sun.misc.Launcher$AppClassLoader.loadClass(Unknown Source)
at java.lang.ClassLoader.loadClass(Unknown Source)
at
net.sf.taverna.raven.spi.SpiRegistry.updateRegistry(SpiRegistry.java:274)
at net.sf.taverna.raven.spi.SpiRegistry.getClasses(SpiRegistry.java:154)
at
net.sf.taverna.raven.spi.InstanceRegistry.getInstances(InstanceRegistry.java:129)
at net.sf.taverna.t2.spi.SPIRegistry.getInstances(SPIRegistry.java:117)
at
net.sf.taverna.t2.ui.menu.impl.MenuManagerImpl.findChildren(MenuManagerImpl.java:492)
at
net.sf.taverna.t2.ui.menu.impl.MenuManagerImpl.doUpdate(MenuManagerImpl.java:481)
at
net.sf.taverna.t2.ui.menu.impl.MenuManagerImpl.update(MenuManagerImpl.java:302)
at
net.sf.taverna.t2.ui.menu.impl.MenuManagerImpl.createToolBar(MenuManagerImpl.java:248)
at
net.sf.taverna.t2.ui.menu.impl.MenuManagerImpl.createToolBar(MenuManagerImpl.java:238)
at
net.sf.taverna.t2.workbench.ui.impl.Workbench.makeToolbarPanel(Workbench.java:220)
at
net.sf.taverna.t2.workbench.ui.impl.Workbench.makeGUI(Workbench.java:180)
at
net.sf.taverna.t2.workbench.ui.impl.Workbench.initialize(Workbench.java:235)
at
net.sf.taverna.t2.workbench.ui.impl.Workbench$1.run(Workbench.java:131)
at java.awt.event.InvocationEvent.dispatch(Unknown Source)
at java.awt.EventQueue.dispatchEvent(Unknown Source)
at java.awt.EventDispatchThread.pumpOneEventForFilters(Unknown Source)
at java.awt.EventDispatchThread.pumpEventsForFilter(Unknown Source)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown Source)
at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
at java.awt.EventDispatchThread.run(Unknown Source)
WARN 2009-07-15 17:08:55,012
(org.hibernate.util.JDBCExceptionReporter:54) - SQL Warning: 10000,
SQLState: 01J01
WARN 2009-07-15 17:08:55,013
(org.hibernate.util.JDBCExceptionReporter:55) - Database
'C:\Temp\Temp\t2platform-56388.db/database' not created, connection
made to existing database instead.
WARN 2009-07-15 17:08:58,278 (net.sf.taverna.raven.spi.Profile:85) -
Not instance of ArtifactImpl: dummy:dummy:dummy
WARN 2009-07-15 17:08:58,279 (net.sf.taverna.zaria.ZBasePane:137) -
No artifact found in profile
for:net.sf.taverna.t2.ui-components:run-ui
WARN 2009-07-15 17:08:58,284 (net.sf.taverna.zaria.ZBasePane:151) -
Cannot determine version for artifact
net.sf.taverna.t2.ui-components:run-ui
WARN 2009-07-15 17:08:58,285 (net.sf.taverna.raven.spi.Profile:85) -
Not instance of ArtifactImpl: dummy:dummy:dummy
WARN 2009-07-15 17:08:58,285 (net.sf.taverna.zaria.ZBasePane:137) -
No artifact found in profile
for:net.sf.taverna.t2.ui-components:activity-palette-ui
WARN 2009-07-15 17:08:58,286 (net.sf.taverna.zaria.ZBasePane:151) -
Cannot determine version for artifact
net.sf.taverna.t2.ui-components:activity-palette-ui
WARN 2009-07-15 17:08:58,287 (net.sf.taverna.raven.spi.Profile:85) -
Not instance of ArtifactImpl: dummy:dummy:dummy
WARN 2009-07-15 17:08:58,288 (net.sf.taverna.zaria.ZBasePane:137) -
No artifact found in profile
for:net.sf.taverna.t2.ui-impl:contextual-views-impl
WARN 2009-07-15 17:08:58,289 (net.sf.taverna.zaria.ZBasePane:151) -
Cannot determine version for artifact
net.sf.taverna.t2.ui-impl:contextual-views-impl
WARN 2009-07-15 17:08:58,290 (net.sf.taverna.raven.spi.Profile:85) -
Not instance of ArtifactImpl: dummy:dummy:dummy
WARN 2009-07-15 17:08:58,290 (net.sf.taverna.zaria.ZBasePane:137) -
No artifact found in profile
for:net.sf.taverna.t2.ui-components:workflow-explorer
WARN 2009-07-15 17:08:58,291 (net.sf.taverna.zaria.ZBasePane:151) -
Cannot determine version for artifact
net.sf.taverna.t2.ui-components:workflow-explorer
WARN 2009-07-15 17:08:58,292 (net.sf.taverna.raven.spi.Profile:85) -
Not instance of ArtifactImpl: dummy:dummy:dummy
WARN 2009-07-15 17:08:58,293 (net.sf.taverna.zaria.ZBasePane:137) -
No artifact found in profile
for:net.sf.taverna.t2.ui-components:graph-view
WARN 2009-07-15 17:08:58,294 (net.sf.taverna.zaria.ZBasePane:151) -
Cannot determine version for artifact
net.sf.taverna.t2.ui-components:graph-view
ERROR 2009-07-15 17:08:58,673
(net.sf.taverna.zaria.ZRavenComponent:85) - Could not find named
component: servicePanel
ERROR 2009-07-15 17:08:58,752
(net.sf.taverna.zaria.ZRavenComponent:85) - Could not find named
component: workflowexplorer
ERROR 2009-07-15 17:08:58,762
(net.sf.taverna.zaria.ZRavenComponent:85) - Could not find named
component: contextualView
ERROR 2009-07-15 17:08:58,764
(net.sf.taverna.zaria.ZRavenComponent:85) - Could not find named
component: graphview
WARN 2009-07-15 17:08:58,890
(net.sf.taverna.t2.ui.menu.impl.MenuManagerImpl:429) - No sub
components found for section
http://taverna.sf.net/2008/t2workbench/menu#graphSaveMenuSection
WARN 2009-07-15 17:08:58,945
(net.sf.taverna.t2.ui.menu.impl.MenuManagerImpl:448) - Separator found
within section
WARN 2009-07-15 17:08:58,946
(net.sf.taverna.t2.ui.menu.impl.MenuManagerImpl:448) - Separator found
within section
WARN 2009-07-15 17:08:59,068
(net.sf.taverna.zaria.ZRavenComponent:85) - Can't serialize
null-valued artifact or className
WARN 2009-07-15 17:08:59,069
(net.sf.taverna.zaria.ZRavenComponent:85) - Can't serialize
null-valued artifact or className
WARN 2009-07-15 17:08:59,070
(net.sf.taverna.zaria.ZRavenComponent:85) - Can't serialize
null-valued artifact or className
WARN 2009-07-15 17:08:59,070
(net.sf.taverna.zaria.ZRavenComponent:85) - Can't serialize
null-valued artifact or className
INFO 2009-07-15 17:08:59,090
(net.sf.taverna.t2.workbench.ui.impl.WorkbenchPerspectives:460) -
Saved net.sf.taverna.t2.ui.perspectives.design.DesignPerspective
perspective into file.
INFO 2009-07-15 17:08:59,107
(net.sf.taverna.t2.workbench.ui.impl.WorkbenchPerspectives:460) -
Saved net.sf.taverna.t2.ui.perspectives.results.ResultsPerspective
perspective into file.
I tried putting activity and ui projects on my classpath but nothing changed.
Thanks,
-Yoshinobu
On Wed, Jul 15, 2009 at 1:46 PM, Yoshinobu Kano<[email protected]> wrote:
> Hi Hackers,
>
> I am trying to create my own local activity from my own java code.
> How can I test my activity/activity-ui from Eclipse or in some
> local-only-way inside Taverna (using the PreLauncher)?
>
> Thanks,
>
> -Yoshinobu
> --
> Yoshinobu Kano (Given/Family)
> [email protected]
> Project Research Associate, the University of Tokyo / U-Compare Project Lead
> http://www-tsujii.is.s.u-tokyo.ac.jp/ http://u-compare.org/kano/
>
--
Yoshinobu Kano (Given/Family)
[email protected]
Project Research Associate, the University of Tokyo / U-Compare Project Lead
http://www-tsujii.is.s.u-tokyo.ac.jp/ http://u-compare.org/kano/
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