Thank you for your detailed descriptions!
> The 'Data' table is no longer populated as it was redundant by the
> normal Taverna Database storage of values. If you set up the Taverna
> reference service to also store the data values in mySQL, you should
> also get the data stored in the database.
>    
I don't know what you mean by "Taverna reference service". How can I 
configure it? Until now I only made changes in 
DataAndProvenance-6BD3F5C1-C68D-4893-8D9B-2F46FA1DDB19.config

> mysql>  SELECT i.contents,p.portName,pr.processorName,p.isInputPort
> FROM Port p JOIN DataBinding db ON (p.portId=db.portId) JOIN
> AbstractExternalReference a ON (substring_index(substring_index(a.id,
> ":", -2),":",1)=substring_index(t2reference, "?", -1)) JOIN
> InlineStringReference i ON (i.bean_id=a.bean_id) JOIN Processor pr ON
> (p.processorId=pr.processorId);
> +----------+----------+---------------+-------------+
> | contents | portName | processorName | isInputPort |
> +----------+----------+---------------+-------------+
> | 666      | value    | userID_value  |           0 |
> | 666      | userID   | REST_Service  |           1 |
> +----------+----------+---------------+-------------+
> 2 rows in set (0.00 sec)
>    
This works fine,  but the table "InlineStringReference" only holds the 
values of "inner processors", i.e. not the global workflow 
inputs/outputs, which I need.

> We're planning on exposing the Taverna Provenance API and RDF export
> of provenance for Taverna 2.3, so this might be much easier for you to
> deal with than the internals of the database.
>
>    
Will Taverna Server 2.3 also have those?

Regards,
Dennis

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