Hi, Thanks for the answer and for redeploying the library.
I used http://code.google.com/p/taverna/source/browse/taverna/engine/net.sf.taverna.t2.taverna-commandline/trunk/taverna-commandline-common/src/main/java/net/sf/taverna/t2/commandline/data/BaclavaDocumentHandler.java as example to read and write baclava files. I'll look into the Data bundle format later. Cheers, Markus Am 2012-08-29 17:54, schrieb Stian Soiland-Reyes: > The Baclava library from > https://code.google.com/p/taverna/source/browse/taverna/utils/baclava > was previously deployed in the Maven repository, but due to a recent > server failure we lost some modules that had recently been deployed > and was not covered by the backup. We have redeployed almost all of > those, but not those relating to an internal Taverna 3 release - of > which this library was a part. > > I have now redeployed version 0.1.0 - > http://build.mygrid.org.uk/maven/repository/net/sf/taverna/t2/baclava/0.1.0/ > > > To use this, add this to your POM: > > <dependencies> > <dependency> > <groupId>net.sf.taverna.t2</groupId> > <artifactId>baclava</artifactId> > <version>0.1.0</version> > </dependency> > </dependencies> > <repositories> > <repository> > <releases /> > <snapshots> > <enabled>false</enabled> > </snapshots> > <id>mygrid-repository</id> > <name>myGrid Repository</name> > <url>http://build.mygrid.org.uk/maven/repository</url> > </repository> > </repositories> > > > You will probably want to use > net.sf.taverna.t2.baclava.factory.DataThingXMLFactory > > See > https://code.google.com/p/taverna/source/browse/taverna/utils/baclava/tags/baclava-0.1.0/src/main/java/net/sf/taverna/t2/baclava/factory/DataThingXMLFactory.java > > You will need to use JDOM to parse or create the actual XML files. > > > Note that this code is legacy code pretty much moved across from > Taverna 1.7, and not particularly straight forward to understand. > > Longer term we want to replace Baclava with a Data Bundle format: > http://dev.mygrid.org.uk/wiki/display/developer/Data+bundle > > > On Fri, Aug 24, 2012 at 1:43 PM, Markus Plangg <[email protected]> > wrote: >> Hi, >> >> the rest of the application is written in Java so Ruby would not be so >> easy to integrate. >> >> Is the Java library somewhere in the a maven repository? I think I saw >> it in the mygrid repository when you answered the mail a few weeks back >> but I can't find it any more. >> >> Cheers, >> Markus >> >> >> On 07/25/2012 01:45 AM, [email protected] wrote: >>> On 24/07/2012 12:45, Markus Plangg wrote: >>>> Hi, >>> Hello >>> >>>> is there a Java library to read and write Baclava files? >>> Are you limited to using Java? If Ruby is OK then there is a Ruby Gem >>> at https://github.com/myGrid/taverna-baclava-gem >>> >>>> I saw that there is a package org.embl.ebi.escience.baclava on >>>> http://build.mygrid.org.uk/taverna/api/org/embl/ebi/escience/baclava/package-use.html >>>> >>>> but taverna also has something similar at >>>> https://code.google.com/p/taverna/source/browse/taverna/utils/baclava/. >>>> If I wanted to write and read Baclava files to use with Taverna which >>>> library would be best to use? >>> It should be the second one. >>> >>>> Cheers, >>>> Markus >>> Alan >> >> ------------------------------------------------------------------------------ >> Live Security Virtual Conference >> Exclusive live event will cover all the ways today's security and >> threat landscape has changed and how IT managers can respond. Discussions >> will include endpoint security, mobile security and the latest in malware >> threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ >> _______________________________________________ >> taverna-hackers mailing list >> [email protected] >> Web site: http://www.taverna.org.uk >> Mailing lists: http://www.taverna.org.uk/about/contact-us/ >> Developers Guide: http://www.taverna.org.uk/developers/ > > ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ _______________________________________________ taverna-hackers mailing list [email protected] Web site: http://www.taverna.org.uk Mailing lists: http://www.taverna.org.uk/about/contact-us/ Developers Guide: http://www.taverna.org.uk/developers/
