Follow-up Comment #2, bug #496 (project tex4ht):
This was really complicated issue. I am not sure that I fixed it completely.
\AtBeginDocument command is not available at the moment when .4ht files are
processed anymore. It seems that every time it is used, it causes loss of sub
and superscripts. I haven't found why, maybe later.
For now, I've fixed this issue for Hyperref, so it compiles correctly for your
document.
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