I got the error:
Problem occurred during compilation with the command line below:
/usr/bin/g++ -shared -g -O3 -fno-math-errno -Wno-unused-label
-Wno-unused-variable -Wno-write-strings
-DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -m64 -fPIC
-I/scratch/user/tools/anaconda2/lib/python2.7/site-packages/numpy/core/include
-I/scratch/user/tools/anaconda2/include/python2.7
-I/scratch/user/tools/anaconda2/lib/python2.7/site-packages/theano/gof
-L/scratch/user/tools/anaconda2/lib -fvisibility=hidden -o
/home/user/.theano/compiledir_Linux-3.10-el7.x86_64-x86_64-with-centos-7.3.1611-Core-x86_64-2.7.13-64/tmpAKnaE0/d16654b784f584f17fdc481825fd2cca.so
/home/user/.theano/compiledir_Linux-3.10-el7.x86_64-x86_64-with-centos-7.3.1611-Core-x86_64-2.7.13-64/tmpAKnaE0/mod.cpp
-lpython2.7
['nvcc', '-shared', '-O3', '-m64', '-Xcompiler',
'-DCUDA_NDARRAY_CUH=c72d035fdf91890f3b36710688069b2e,-DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION,-fPIC,-fvisibility=hidden',
'-Xlinker',
'-rpath,/home/user/.theano/compiledir_Linux-3.10-el7.x86_64-x86_64-with-centos-7.3.1611-Core-x86_64-2.7.13-64/cuda_ndarray',
'-I/scratch/user/tools/anaconda2/lib/python2.7/site-packages/theano/sandbox/cuda',
'-I/scratch/user/tools/anaconda2/lib/python2.7/site-packages/numpy/core/include',
'-I/scratch/user/tools/anaconda2/include/python2.7',
'-I/scratch/user/tools/anaconda2/lib/python2.7/site-packages/theano/gof',
'-L/scratch/user/tools/anaconda2/lib', '-o',
'/home/user/.theano/compiledir_Linux-3.10-el7.x86_64-x86_64-with-centos-7.3.1611-Core-x86_64-2.7.13-64/cuda_ndarray/cuda_ndarray.so',
'mod.cu', '-lcublas', '-lpython2.7', '-lcudart']
In file included from
/home/user/.theano/compiledir_Linux-3.10-el7.x86_64-x86_64-with-centos-7.3.1611-Core-x86_64-2.7.13-64/tmpAKnaE0/mod.cpp:2:0:
/usr/include/c++/4.8.2/iostream:38:28: fatal error: bits/c++config.h: No such
file or directory
#include
^
compilation terminated.
after installing Theano (0.9.0) on Centos 7 with Cuda 8.0. It looks like
bits/c++config.h can not be found. However, it has been compiled in
/usr/include/c++/4.8.5/i686-redhat-linux/bits/
atomic_word.h c++allocator.h c++io.h cpu_defines.h ctype_inline.h
error_constants.h gthr-default.h gthr-posix.h messages_members.h
os_defines.h stdtr1c++.h
basic_file.h c++config.h c++locale.h ctype_base.h cxxabi_tweaks.h
extc++.h gthr.h gthr-single.h opt_random.h stdc++.h
time_members.h
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