On 2018-05-03 04:50 PM, ivan.d.marroq...@gmail.com wrote:
Thanks for the suggestion.
I checked the disk space and have ~700Gbytes. Then, I tested with
"base_compiledir" using the entire path.
This time, a sub-folder with this name was created:
UsersIMarroquinDocumentsMy_Python_ScriptsMLPSEG_contestIndependent_ScriptsModel_1
backslashes may have not been escaped enough, maybe with
os.environ["THEANO_FLAGS"] = r"basecompiledir=C:\\Users\\ ..."
I am running the command: python <script.py> from a conda window. I
attached the compilation error by Theano and the problem occurs when it
tries to open the *.pyd file.
OK, the log file says the attempt command was:
> "C:\Temp\Anaconda3\Library\mingw-w64\bin\g++.exe" -shared -g -O3
-fno-math-errno -Wno-unused-label -Wno-unused-variable
-Wno-write-strings -march=haswell -mmmx -mno-3dnow -msse -msse2 -msse3
-mssse3 -mno-sse4a -mcx16 -msahf -mmovbe -maes -mno-sha -mpclmul
-mpopcnt -mabm -mno-lwp -mfma -mno-fma4 -mno-xop -mbmi -mbmi2 -mno-tbm
-mavx -mavx2 -msse4.2 -msse4.1 -mlzcnt -mno-rtm -mno-hle -mrdrnd -mf16c
-mfsgsbase -mno-rdseed -mno-prfchw -mno-adx -mfxsr -mxsave -mxsaveopt
-mno-avx512f -mno-avx512er -mno-avx512cd -mno-avx512pf -mno-prefetchwt1
-mno-clflushopt -mno-xsavec -mno-xsaves -mno-avx512dq -mno-avx512bw
-mno-avx512vl -mno-avx512ifma -mno-avx512vbmi -mno-clwb -mno-pcommit
-mno-mwaitx --param l1-cache-size=32 --param l1-cache-line-size=64
--param l2-cache-size=25600 -mtune=haswell
-DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -m64 -DMS_WIN64
-I"C:\Temp\Anaconda3\lib\site-packages\numpy\core\include"
-I"C:\Temp\Anaconda3\include"
-I"C:\Temp\Anaconda3\lib\site-packages\theano\gof\c_code"
-L"C:\Temp\Anaconda3\libs" -L"C:\Temp\Anaconda3" -o
"C:\Users\IMarroquin\Documents\My_Python_Scripts\MLP\SEG_contest\Independent_Scripts\Model_1\compiledir_Windows-7-6.1.7601-SP1-Intel64_Family_6_Model_63_Stepping_2_GenuineIntel-3.6.1-64\tmp1vufnfg1\m885ff006a95d626dac547a7bdfdb471bbf058622ece2b4435e42316c4012ea56.pyd"
"C:\Users\IMarroquin\Documents\My_Python_Scripts\MLP\SEG_contest\Independent_Scripts\Model_1\compiledir_Windows-7-6.1.7601-SP1-Intel64_Family_6_Model_63_Stepping_2_GenuineIntel-3.6.1-64\tmp1vufnfg1\mod.cpp"
-lpython36
The name of the "tmp..." directory changed, but that is expected (it is
randomly generated each time).
The file name for the .pyd is the same as before, since it only depends
on the file's content.
Can you try running that command line from the conda window?
Also, I tried with this command os.environ["THEANO_FLAGS"]=
'base_compiledir=Model_1' and unfortunately, I ended with the same
problem (see attached file).
It is interesting that it used to work on Theano 0.9.0
I am hoping that you have other suggestions.
Thanks for all,
Ivan
On Thursday, May 3, 2018 at 3:01:29 PM UTC-5, Pascal Lamblin wrote:
On 2018-05-03 02:00 PM, ivan.d.m...@gmail.com <javascript:> wrote:>
A) Added the
option nocleanup=True to the .theanorc file
Thanks. This makes sure the "mod.c" file you mention later is not
deleted.
> B) The backslash before "Model 1". In my previous attempts in Theano
> 0.9.0, this was the way that I found to make it work.
We have added quotation marks and such in order to better handle paths
on Windows since 0.9, so I'm not surprised.
> Following your suggestion, I edited the header of the script to
> this: os.environ["THEANO_FLAGS"]= "base_compiledir=Model_1"
>
> and ran the script. This time, I noticed an extra sub-folder under
>
"Model_1\compiledir_Windows-7-6.1.7601-SP1-Intel64_Family_6_Model_63_Stepping_2_GenuineIntel-3.6.1-64".
> The sub-folder is named "tmpgqmnjspd", which only contains a
mod.c file
That makes sense.
> The compilation ended with this error:
>
> Exception: ('The following error happened while compiling the node',
> InplaceDimShuffle{x,0}(layer:tanh-1/bias), '\n', 'Compilation failed
> (return status=1): C:/Temp/Anaconda3/Library/mingw-w64/bin/../
>
lib/gcc/x86_64-w64-mingw32/5.3.0/../../../../x86_64-w64-mingw32/bin/ld.exe:
> cannot open output file
>
C:\\Users\\IMarroquin\\Documents\\My_Python_Scripts\\MLP\\SEG_contest\\Independent_Scripts\\Model_1\
>
\compiledir_Windows-7-6.1.7601-SP1-Intel64_Family_6_Model_63_Stepping_2_GenuineIntel-3.6.1-64\\tmpgqmnjspd\\m885ff006a95d626dac547a7bdfdb471bbf058622ece2b4435e42316c4012ea56.pyd:
> No such file or directory\r. collect2.exe: error: ld returned 1 exit
> status\r. ', '[InplaceDimShuffle{x,0}(layer:tanh-1/bias)]')
>
> It seems that the source of the problem is a missing file with
extension
> *.pyd
From my understanding, the process is not able to open the *output*
file (the .pyd) in order to *write* to it, and so the compilation
cannot
proceed.
I find that surprising, since it was able to create the mod.c file.
Maybe it's a quota problem, or not enough free disk space?
Can you specify a full path, for instance:
os.environ["THEANO_FLAGS"] =
"base_compiledir=C:\\Users\\IMarroquin\\Documents\\My_Python_Scripts\\MLP\\SEG_contest\\Independent_Scripts\\Model_1"
Another thing to try would be to put a breakpoint or try to print the
compilation command line that is executed, and try to execute it
directly from a shell (and the same working directory), rather than
inside Theano.
>
> C) "compiler" instead of "compiledir". Sorry for the confusion, I
made a
> mistake during the copy/paste
>
> Many thanks,
> Ivan
>
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