>
> 1) Am I right in thinking that all css bits and bobs throughout will be 
> tagged with Stylesheet?
>

There several ways to apply styles:

First (and second) you have separate stylesheet tiddlers, i.e tagged 
$:/tags/Stylesheet. If it is a *normal stylesheet* it is of the tiddler 
type "text/css". But it can also be a *wikitext stylesheet* where you can 
mix css and wikitext. Such stylesheets don't need a specified tiddler type.
Third you can use a *styleblock* in the tiddler, i.e <style>.like 
{th:is}</style>
And fourth, *inline styles* in the html tag or widget tag, e.g <div 
style="like:this;"></div> which you can also use the wikitext variant for, 
i.e @@color:red; Hello@@ or if you want to apply a class then @@.likeso 
Hello@@

2) If not, is there another reliable way to ID wherever there's CSS being 
> applied? (Is it just look at all the css system tiddlers?)
>

So, given my reply to your first question, as you see it is not super easy 
to locate every place where css is applied BUT the "proper" way to do 
things is to use separate stylesheets so this is the main way things are 
done in the core.

I don't quite understand your questions 3 and 4.

<:-)

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