I don't know the cause of it is this case but I have been running into times when deleting certain tiddlers on node the change isn't properly propagated back to the file system. I haven't been able to find anything consistent about what is happening they way that you have though.
So it may not be only your wiki but I haven't been able to consistently reproduce it and I have no idea how to fix it. -- You received this message because you are subscribed to the Google Groups "TiddlyWiki" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at https://groups.google.com/group/tiddlywiki. To view this discussion on the web visit https://groups.google.com/d/msgid/tiddlywiki/eeecf1bb-5827-4bc2-b38f-ca732d34f67d%40googlegroups.com. For more options, visit https://groups.google.com/d/optout.

