The entry in the FE5680 FAQ on this subject may be helpful, if you haven't 
tried it already.  
http://ko4bb.com/dokuwiki/doku.php?id=precision_timing:fe5680a_faq#what_if_my_5680a_output_does_not_lock_up_after_several_minutes

I have 3 of those units; one did not lock until I adjusted the trim-cap C217 to 
bring the free-running frequency of the oscillator into range. If you have a 
reasonably accurate counter you can check if this is the problem or not by 
seeing if the output frequency (which ramps up and down prior to lock) crosses 
through 10.000000 MHz or not. Mine did not.
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