Paul Brandon:
The reason being that once we introduce the possible wild card of 
divine intervention, which is by definition beyond prediction and 
control (by us mortals, at least), we can never know when our results 
are due to our manipulation of experimental variables or to divine 
intervention.

Hence, we can as scientists believe in a deity, but not one who 
actively intervenes in the mundane.  when we do science, we must 
assume that miracles do not occur.

This is the incoherence, in the literal sense of not holding together.

Jim Guinee:
That's probably the best summary yet on this issue.

 

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