I do create a new instance, but each instance grabs a connection from
the pool instead of making a new connection.  I think this is ok.  Maybe
my problem is with SQL Server locks instead of anything on the tomcat
side.  It just seems like something on the tomcat side should timeout
instead of locking up the server.  If I assume that it's a deadlock in
SQL Server (and for some reason SQL Server isn't reporting it), can
anyone think of a reason why tomcat would not respond?  The connection
pool still has connections available.  It could be that tomcat isn't
really hanging.  I have a filter set up that checks to see if the user
is authenticated, so the database is hit before every page request.

-----Original Message-----
From: Steve Nelson [mailto:[EMAIL PROTECTED] 
Sent: Friday, January 09, 2004 1:59 PM
To: 'Tomcat Users List'
Subject: RE: Tomcat Deadlock





Hrmm... Do you create a new instance of the DatabaseManager class during
each load of the page? 

For some strange, wacky reason I thought you were using it almost as a
singleton. If that's not the case then you probably are doing the right
thing with that, and I am just talkin fluff.


-----Original Message-----
From: Hooper, Brian [mailto:[EMAIL PROTECTED]
Sent: Friday, January 09, 2004 12:50 PM
To: Tomcat Users List
Subject: RE: Tomcat Deadlock


I followed the example for Tomcat 4.x when I set it up.  The only reason
I have a separate object is to hide some of the complexity.  I'm pretty
sure it's using a connection pool right now.

-----Original Message-----
From: Steve Nelson [mailto:[EMAIL PROTECTED] 
Sent: Friday, January 09, 2004 1:25 PM
To: 'Tomcat Users List'
Subject: RE: Tomcat Deadlock



Take a look at this. 

http://jakarta.apache.org/tomcat/tomcat-5.0-doc/jndi-datasource-examples
-how
to.html

Every time you load a page open the connection, then close it to release
it to the pool. That way each thread should get 1 connection.


-----Original Message-----
From: Hooper, Brian [mailto:[EMAIL PROTECTED]
Sent: Friday, January 09, 2004 12:20 PM
To: Tomcat Users List
Subject: RE: Tomcat Deadlock


I thought I was by defining the data source (using
org.apache.commons.dbcp.BasicDataSourceFactory) in my server.xml file
and using JNDI to access it?

-----Original Message-----
From: Steve Nelson [mailto:[EMAIL PROTECTED] 
Sent: Friday, January 09, 2004 12:50 PM
To: 'Tomcat Users List'
Subject: RE: Tomcat Deadlock




First off, if you have the option you might try using a database pool
instead of using 1 connection for multiple threads (As in Tomcat).

At one company I worked for we had some problems with using 1
connection. Data would be read/written incorrectly. Results from one
query would be returned to another etc. Bad driver...probably, but it's
still a safer and better use of resources to let Tomcat give you a
connection from a pool and then release it back when you are done.

-Steve


-----Original Message-----
From: Hooper, Brian [mailto:[EMAIL PROTECTED]
Sent: Friday, January 09, 2004 11:46 AM
To: Tomcat Users List
Subject: RE: Tomcat Deadlock


The code itself is pretty long.  Maybe it would be better if I explain
how I handle database connectivity (which I'm guessing has some flaws),
and I know I should be encapsulating my queries in EJB's, but for now I
just have a lot of inline SQL in my Actions.  I use a DatabaseManager
class (at the end of the e-mail) to connect to my database.  If an
action needs to connect, it makes a new DatabaseManager object.  It uses
the methods in the class, then at the end it calls a function to clean
up the connection, etc.  Here is the code for the database manager
class:

package WIPT;

import java.sql.*;
import javax.sql.*;
import java.util.*;
import java.lang.*;
import java.io.*;
import javax.naming.*;

public class DatabaseManager {
    
    // Data Members
    
    // Keep track of the current database in use for transactions
    private String dbName;
    // The data source
    private DataSource ds;
    // The connection
    private Connection conn;
    // The statement
    private Statement stmt;
    // The prepared statement
    private PreparedStatement pstmt;
    // The callable statement (for stored procedures)
    private CallableStatement cstmt;
    // If transactions are being used or not
    private boolean transaction;
    
    // Empty constructor
    public DatabaseManager() throws Exception {
        // Initialize the database objects to null initially
        nullObjects();
        // Initialize the database objects to their real values
        try {
            // Default the database to WIPT and not to use transactions
            this.dbName = "wipt";
            this.transaction = false;
            initDataSource(this.dbName);
            initConnection(this.transaction);
        }
        catch (Exception e) {
            cleanUpDatabase();
            throw new Exception("Unable to initialize the WIPT
database");
        }
    }

    // Overloaded constructor to allow the transaction level to be
specified
    public DatabaseManager(boolean transact) throws Exception {
        // Initialize the database objects to null initially
        nullObjects();
        // Initialize the database objects to their real values
        try {
            this.dbName = "wipt";
            this.transaction = transact;
            initDataSource(this.dbName);
            initConnection(this.transaction);
        }
        catch (Exception e) {
            cleanUpDatabase();
            throw new Exception("Unable to initialize the WIPT
database");
        }
    }

    // Overloaded constructor to allow the database to be used ("wipt"
or "user")
    public DatabaseManager(String dbName) throws Exception {
        try {
            if (dbName != null && dbName.toLowerCase().equals("user"))
                this.dbName = "user";
            else
                this.dbName = "wipt";
            this.transaction = false;
            initDataSource(this.dbName);
            initConnection(this.transaction);
        }
        catch (Exception e) {
            cleanUpDatabase();
            throw new Exception("Unable to initialize the WIPT
database");
        }
    }

    // Overloaded constructor to allow the transaction level to be
specified and the database to be used ("wipt" or "user")
    public DatabaseManager(boolean transact, String dbName) throws
Exception {
        try {
            if (dbName != null && dbName.toLowerCase().equals("user"))
                this.dbName = "user";
            else
                this.dbName = "wipt";
            this.transaction = transact;
            initDataSource(this.dbName);
            initConnection(this.transaction);
        }
        catch (Exception e) {
            cleanUpDatabase();
            throw new Exception("Unable to initialize the WIPT
database");
        }
    }
    
    // Return the dbName being used
    public String getDBName() {
        return this.dbName;
    }
    
    // Initialize the data source
    private void initDataSource(String dbName) throws Exception {
        try {
            Context ctx = new InitialContext();
            if (ctx == null)
                throw new Exception("Unable to initialize the WIPT
database.");
            else {
                if (dbName != null &&
dbName.toLowerCase().equals("user")) {
                    this.dbName = "user";
                    this.ds =
(DataSource)ctx.lookup(Globals.DB_USER_JNDI_NAME);
                }
                else {
                    this.dbName = "wipt";
                    this.ds =
(DataSource)ctx.lookup(Globals.DB_WIPT_JNDI_NAME);
                }
            }
        }
        catch (Exception e) {
            cleanUpDatabase();
            throw new Exception(e);
        }
    }
    
    // Initialize the connection
    private void initConnection(boolean transact) throws Exception {
        try {
            this.conn = this.ds.getConnection();
            if (transact) {
                this.conn.setAutoCommit(false);
 
this.conn.setTransactionIsolation(Connection.TRANSACTION_SERIALIZABLE);
                // Set the LOCK_TIMEOUT
                this.stmt =
conn.createStatement(ResultSet.TYPE_FORWARD_ONLY,
ResultSet.CONCUR_READ_ONLY);
                this.stmt.executeUpdate("SET LOCK_TIMEOUT " +
Globals.DB_LOCK_TIMEOUT + "; ");
                // Commit the LOCK_TIMEOUT
                //commit();
            }
            else {
                this.conn.setAutoCommit(true);
 
this.conn.setTransactionIsolation(Connection.TRANSACTION_READ_UNCOMMITTE
D);
                // Set the LOCK_TIMEOUT
                this.stmt =
conn.createStatement(ResultSet.TYPE_FORWARD_ONLY,
ResultSet.CONCUR_READ_ONLY);
                this.stmt.executeUpdate("SET LOCK_TIMEOUT " +
Globals.DB_LOCK_TIMEOUT + "; ");
            }
        }
        catch (Exception e) {
            cleanUpDatabase();
            throw new Exception(e);
        }
    }
    
    public ResultSet runSQL(String sqlstmt) throws Exception {
        try {
            return this.stmt.executeQuery(sqlstmt);
        }
        catch (Exception e) {
            cleanUpDatabase();
            throw new Exception(e);
        }
    }
    
    public int runUpdateSQL(String sqlstmt) throws Exception {
        try {
            return this.stmt.executeUpdate(sqlstmt);
        }
        catch (Exception e) {
            cleanUpDatabase();
            throw new Exception(e);
        }
    }
    
    public ResultSet runStoredProc(String sqlstmt) throws Exception {
        try {
            this.cstmt = this.conn.prepareCall(sqlstmt,
ResultSet.TYPE_FORWARD_ONLY, ResultSet.CONCUR_READ_ONLY);
            return this.cstmt.executeQuery();
        }
        catch (Exception e) {
            cleanUpDatabase();
            throw new Exception(e);
        }
    }
    
    public int runUpdateStoredProc(String sqlstmt) throws Exception {
        try {
            this.cstmt = this.conn.prepareCall(sqlstmt,
ResultSet.TYPE_FORWARD_ONLY, ResultSet.CONCUR_READ_ONLY);
            return this.cstmt.executeUpdate();
        }
        catch (Exception e) {
            cleanUpDatabase();
            throw new Exception(e);
        }
    }
    
    // Commit the database connection
    public void commit() throws Exception {
        try {
            if (this.transaction) {
                this.conn.commit();
            }
        }
        catch (Exception e) {
            cleanUpDatabase();
            throw new Exception(e);
        }
    }
    
    // End the database connection
    public void end() {
        try {
            if (this.transaction) {
                this.conn.commit();
            }
        }
        catch (Exception e) {}
        finally {
            cleanUpDatabase();
        }
    }
    
    // Rollback the database connection
    public void rollbackDB() {
        try {
            if (this.transaction) {
                this.conn.rollback();
            }
        }
        catch (Exception e) {}
        finally {
            cleanUpDatabase();
        }
    }
    
    // Set the database objects to null.  Only done on object creation!!
    private void nullObjects() {
        this.ds = null;
        this.conn = null;
        this.stmt = null;
        this.pstmt = null;
        this.cstmt = null;
    }
    
    // Clean up database objects
    private void cleanUpDatabase() {
        if (this.stmt != null) {
            try { this.stmt.close(); } catch (SQLException e) { ; }
            this.stmt = null;
        }
        if (this.pstmt != null) {
            try { this.pstmt.close(); } catch (SQLException e) { ; }
            this.pstmt = null;
        }
        if (this.cstmt != null) {
            try { this.cstmt.close(); } catch (SQLException e) { ; }
            this.cstmt = null;
        }
        if (this.conn != null) {
            try { this.conn.close(); } catch (SQLException e) { ; }
            this.conn = null;
        }
        if (this.ds != null)
            this.ds = null;
    }
    
    public void destroy() {
        cleanUpDatabase();
        this.dbName = null;
    }
}

-----Original Message-----
From: Shapira, Yoav [mailto:[EMAIL PROTECTED] 
Sent: Friday, January 09, 2004 11:23 AM
To: Tomcat Users List
Subject: RE: Tomcat Deadlock



Howdy,
Can you share your code that serves the page that locked up?

Yoav Shapira
Millennium ChemInformatics


>-----Original Message-----
>From: Hooper, Brian [mailto:[EMAIL PROTECTED]
>Sent: Friday, January 09, 2004 11:19 AM
>To: Tomcat Users List
>Subject: Tomcat Deadlock
>
>I'm having a weird problem with Tomcat locking up.  I have a couple of
>functions on my site that rely heavily on transactions.  To do a simple

>load test, I picked the function that hits the database the most and
>opened that same page in two different browser windows.  I hit the 
>submit button at roughly the same time, and waited.  It appeared that 
>both browser windows stalled.  I looked at the processes in SQL Server
>(2000) and it said that all of the processes for the app were sleeping,

>and the two being used were sitting on insert statements for the same
>table (database deadlock?).  I let both browsers sit trying to load for

>a lot longer than it should have taken for the page to finish, then
just
>closed the windows.  After that, the site was no longer accessible.
The
>only way to get it working again was to restart the Tomcat service.
>
>Looking at the various log files, the only entry that appears
>interesting is the following from the site's log: 2004-01-09 10:43:18
>StandardWrapper[/WIPT:action]: Waiting for 2
>instance(s) to be deallocated
>
>I'm using tomcat 4.1.27 with SQL Server 2000 on a Win2K box.  I've been

>having similar problems off and on for the last couple of weeks and
have
>tried a number of different things to fix it.  I made sure I closed all

>connections, statements, and result sets.  I put all of the close code
>in a finally block.  Another quick question - if the browser is closed 
>in the middle of an operation, is the code in the finally block 
>executed?
>
>Here is the JNDI data source definition from server.xml:
>
>  <Resource name="jdbc/WIPTDataSource" auth="Container"
>type="javax.sql.DataSource"/>
>  <ResourceParams name="jdbc/WIPTDataSource">
>
><parameter><name>factory</name><value>org.apache.commons.dbcp.BasicData
S
>ourceFactory</value></parameter>
>
>
><parameter><name>driverClassName</name><value>com.jnetdirect.jsql.JSQLD
r
>iver</value></parameter>
>
><parameter><name>url</name><value>jdbc:JSQLConnect://XXXX:1433/WIPT</va
l
>ue></parameter>
>    <parameter><name>username</name><value>XXXX</value></parameter>
>    <parameter><name>password</name><value>XXXX</value></parameter>
>
>    <parameter><name>maxActive</name><value>15</value></parameter>
>    <parameter><name>maxIdle</name><value>15</value></parameter>
>    <parameter><name>minIdle</name><value>2</value></parameter>
>    <parameter><name>maxWait</name><value>10000</value></parameter>
>
>    <parameter><name>validationQuery</name><value>SELECT
>1+1</value></parameter>
>    <parameter><name>testOnBorrow</name><value>true</value></parameter>
>    <parameter><name>testOnReturn</name><value>true</value></parameter>
>
<parameter><name>testWhileIdle</name><value>true</value></parameter>
>
><parameter><name>timeBetweenEvictionRunsMillis</name><value>1800000</va
l
>ue></parameter>
>
<parameter><name>testWhileIdle</name><value>true</value></parameter>
>
><parameter><name>numTestsPerEvictionRun</name><value>3</value></paramet
e
>r>
>
>
><parameter><name>removeAbandoned</name><value>true</value></parameter>
>
><parameter><name>removeAbandonedTimeout</name><value>300</value></param
e
>ter>
>    <parameter><name>logAbandoned</name><value>true</value></parameter>
>  </ResourceParams>
>
>Thanks!
>-Brian
>
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