I am using a Macbook Pro with 4 GB of memory on OS X 10.8.5. I do not see 
in Preferences or Help anything about human-readable labels.

Jack

On Sunday, June 1, 2014 5:09:43 PM UTC-7, Holger Knublauch wrote:
>
>  Hi Jack,
>
> I have created an artificial set of 100k classes, all rdfs:subClassOf 
> owl:Thing to confirm some of the slowness that you are seeing. I can 
> confirm that you should switch the class tree to have rdfs:Resource as its 
> root as this will prevent all subclasses of owl:Thing from appearing by 
> default. You can reach this option from the drop down menu of the Classes 
> view - uncheck owl:Thing as root class. That should allow you to open your 
> file with reasonably speed and then close the (useless) class tree before 
> it drags down the system.
>
> With 100k classes, it takes about 1 minute to open owl:Thing and I can see 
> in the Jave profiler that this is a general slowness of the Eclipse 
> platform's tree component as only a fraction of this time is spent in 
> TopBraid-specific code. But my question is why is your specific ontology 
> taking 20 times as long. Did you activate human-readable labels (if yes 
> please try switching that off)? What hardware are you using and do you have 
> enough memory?
>
> Thanks
> Holger
>
>
> On 5/31/2014 7:45, Jack Hodges wrote:
>  
> Scott, 
>
>  Thank you for the help!
>
>  I did as you suggested (a few times) and then closed and reopened the 
> model. Here is the timeline (just finished): 
>
>  2:15 pm: Opened the model
> 2:20 pm: Get the "Applying default superclass inferences to class..." 
> message in the Progress Information dialog (in the end there were just over 
> 90,000 classes)
> 2:21 pm: Get the "Checking visibility" message in the Progress Information 
> dialog
> 2:23 pm: Get the "Showing model" message in the Progress Information dialog
> 2:38 pm: Get the "Opening editor" message in the Progress Information 
> dialog
> 2:43 pm: Load complete
>
>  So there was (a lot of) improvement, but it is till taking almost 30 
> minutes to load. Is this the best I can expect or are there more tricks I 
> can apply?
>
>  Thank you!
>
>  Jack
>
> On Wednesday, May 28, 2014 2:57:48 PM UTC-7, Scott Henninger wrote: 
>>
>>  Jack; There are a number of models that fail to assert "root" classes, 
>> i.e. all classes that are subclasses of owl:Thing.  While technically 
>> correct, these are difficult to process, as the system has to find all of 
>> the class definitions that have no subClassOf definitions.  This is the 
>> "Applying Superclass Inferences" statement.
>>
>>  The way to speed this up is to assert these inferences, either in the 
>> model or another import.  
>>
>>  One way to easily assert the inferences is to choose Model > Open with 
>> SWA Default Application in Composer.  Again, this will take some time, but 
>> in the end it will make the assertions and you can save them so you do not 
>> have to do this in the future.
>>
>> -- Scott
>>
>> On May 28, 2014, at 3:32 PM, Jack Hodges <jhodg...@gmail.com> wrote:
>>
>>   I added an import into a model I am constructing. This import is the 
>> FMA (anatomy ontology) and has tens of thousands of classes. It took a 
>> couple of minutes to add it. I later had to exit TBC and when I reopened 
>> the application the Progress Information dialog said the app was "Applying 
>> Superclass Inferences" for an hour (I have since changed the preferences to 
>> suppress this step). Then the Progress Information dialog told me it was 
>> "Checking Visibility" which it did for another hour. I could not find a 
>> preference to suppress this. Considering that it didn't take much time to 
>> initially import the models, why would it take so long to reload 
>> everything, and can I configure TBC to load faster? Btw, the models just 
>> finished loading and its been a couple of hours. Thank you anyone! 
>>
>>  Jack
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