Could you paste the code that you have right now so that I can see the full
context?
Thanks
Holger
> On 30 Jan 2024, at 11:58 am, Kasia Kryczka <sparqlnew...@gmail.com> wrote:
>
> Hi Holger,
>
>
> Unfortunately, the solution does not give the expected results.
>
> It appears that when we add the history of changes to all the includes, the
> history is saved in the included ontology and not in the collection we are in.
>
> Could you please advise whether this script can be adapted so that the
> history of includes is saved in the collection we are in, or whether this is
> not possible?
>
> Br,
>
> Kasia
> On Wednesday, January 10, 2024 at 12:59:52 PM UTC+1 Kasia Kryczka wrote:
>> Hi Holger,
>>
>> This is great :)
>>
>> Thank you,
>>
>> Br,
>>
>> Kasia
>>
>> On Monday, January 8, 2024 at 2:08:02 PM UTC+1 Holger Knublauch wrote:
>>> Ok in that case, use something like
>>>
>>> let triples = graph.withDataGraph(dataset.withImports(graphURI), () =>
>>> graph.triples(orphan));
>>>
>>> (You will likely want to filter out owl:Thing and all kinds of other
>>> classes that will be listed.)
>>>
>>> Holger
>>>
>>>
>>>
>>>> On 8 Jan 2024, at 2:03 pm, Kasia Kryczka <sparql...@gmail.com <>> wrote:
>>>>
>>>
>>>> Hi Holger,
>>>>
>>>> I got a request to create a dummy change history comment for all owl:Class
>>>> both defined locally and those which are included from all imports.
>>>> These owl:Thing and owl:Nothing do not need to have a dummy comment but
>>>> I have much more included classes from imports.
>>>>
>>>> Br,
>>>>
>>>> Kasia
>>>>
>>>> On Monday, January 8, 2024 at 1:45:49 PM UTC+1 Holger Knublauch wrote:
>>>>> Ok thanks, I better see what you're trying to do now. My previous "hint"
>>>>> was not helpful.
>>>>>
>>>>> I ran the script in my test setup and think there is a mismatch between
>>>>> the use of imported graphs:
>>>>>
>>>>> When you collect the orphans it will walk into the subgraphs, which in my
>>>>> case found imported classes including owl:Thing and owl:Nothing. I don't
>>>>> think you really want to have change history entries for those.
>>>>>
>>>>>>>> let orphans = graph.withDataGraph(dataset.withImports(graphURI)
>>>>>
>>>>> But then when you ask for triples, you're only getting the locally
>>>>> defined triples:
>>>>>
>>>>>>>> let triples = graph.triples(orphan, null, null);
>>>>>
>>>>>
>>>>> Shouldn't both do the same thing and use imported graphs consistently?
>>>>>
>>>>> Why did you want to use dataset.withImports in the first case?
>>>>>
>>>>> In my local tests I can see a dummy change history entry created just
>>>>> fine, assuming the owl:Class is defined locally.
>>>>>
>>>>> Also, to double-check, you really want to only find newly defined
>>>>> owl:Classes and not their instances?
>>>>>
>>>>> Holger
>>>>>
>>>>>
>>>>>
>>>>>> On 8 Jan 2024, at 1:23 pm, Kasia Kryczka <sparql...@gmail.com <>> wrote:
>>>>>>
>>>>>
>>>>>> Hi Holger,
>>>>>>
>>>>>> Unfortunately, it doesn't work.
>>>>>> I get the comment but nothing gets added. The record is empty.
>>>>>> When i look at the console I see correct "orphans" and I changed so the
>>>>>> usedURIs should be a match when filtering but the result is the same.
>>>>>>
>>>>>> let graphURI = 'urn:x-evn-master:test';
>>>>>> graph.withDataGraph(graphURI, () => {
>>>>>> let usedURIs = graph.withDataGraph(graphURI + '.tch', () => {
>>>>>> return graph.select(`
>>>>>> SELECT DISTINCT ?uri
>>>>>> WHERE {
>>>>>> ?t ?o ?uri .
>>>>>> FILTER isIRI(?uri) .
>>>>>> }`).bindings.map(b => b.uri.uri);
>>>>>> });
>>>>>> console.log('Found ' + usedURIs.length);
>>>>>> // console.log(usedURIs);
>>>>>>
>>>>>> Am I missing sth ?
>>>>>>
>>>>>> Br,
>>>>>>
>>>>>> Kasia
>>>>>>
>>>>>> On Friday, January 5, 2024 at 3:56:26 PM UTC+1 Holger Knublauch wrote:
>>>>>>>
>>>>>>>> On 5 Jan 2024, at 3:51 pm, Kasia Kryczka <sparql...@ <>gmail.com
>>>>>>>> <http://gmail.com/>> wrote:
>>>>>>>>
>>>>>>>> Hi Holger,
>>>>>>>>
>>>>>>>>
>>>>>>>> I used a different thing as I need to add a change history to all
>>>>>>>> these objects: I used the following :
>>>>>>>>
>>>>>>>>
>>>>>>>> let graphURI = 'urn:x-evn-master:test';
>>>>>>>> graph.withDataGraph(graphURI, () => {
>>>>>>>> let usedURIs = graph.withDataGraph(graphURI + '.tch', () => {
>>>>>>>> return graph.select(`
>>>>>>>> SELECT DISTINCT ?uri
>>>>>>>> WHERE {
>>>>>>>> ?t teamwork:subject|teamwork:predicate|teamwork:object
>>>>>>>> ?uri .
>>>>>>>> FILTER isIRI(?uri) .
>>>>>>>> }`).bindings.map(b => b.uri.uri);
>>>>>>>> });
>>>>>>>>
>>>>>>>> console.log('Found ' + usedURIs.length);
>>>>>>>> let orphans = graph.withDataGraph(dataset.withImports(graphURI),
>>>>>>>> () =>
>>>>>>>> graph.select(`SELECT ?subject WHERE { ?subject a owl:Class.
>>>>>>>> FILTER isIRI(?subject) }`))
>>>>>>>> .bindings
>>>>>>>> .map(b => b.subject)
>>>>>>>> .filter(subject => !usedURIs.includes(subject.uri));
>>>>>>>>
>>>>>>>> orphans.forEach((orphan) => {
>>>>>>>> console.log('Orphan is ' + orphan.uri);
>>>>>>>> let triples = graph.triples(orphan, null, null);
>>>>>>>> graph.transaction(graphURI + '.tch', 'Create dummy change for
>>>>>>>> ' + orphan.uri, () => {
>>>>>>>> let uuid = graph.eval('STRUUID()');
>>>>>>>> let change = graph.namedNode('urn:x-change:' + uuid);
>>>>>>>> console.log('Change: ' + change.uri);
>>>>>>>> graph.update(`
>>>>>>>> PREFIX dcterms: <http://purl.org/dc/terms/>
>>>>>>>> PREFIX sioc: <http://rdfs.org/sioc/ns#>
>>>>>>>> INSERT {
>>>>>>>> $change rdf:type teamwork:Change ;
>>>>>>>> rdfs:comment "Dummy change entry for
>>>>>>>> ${orphan.uri}";
>>>>>>>> dcterms:created ?now ;
>>>>>>>> sioc:has_creator <urn:x-tb-users:Anonymous4>;
>>>>>>>> teamwork:status teamwork:Committed .
>>>>>>>> }
>>>>>>>> WHERE {
>>>>>>>> BIND (NOW() AS ?now) .
>>>>>>>> }`, {
>>>>>>>> change: change
>>>>>>>> });
>>>>>>>> triples.forEach(triple => {
>>>>>>>> triple.change = change;
>>>>>>>> graph.update(`
>>>>>>>> INSERT {
>>>>>>>> $change teamwork:added [
>>>>>>>> teamwork:object $object ;
>>>>>>>> teamwork:predicate $predicate ;
>>>>>>>> teamwork:subject $subject ;
>>>>>>>> ]
>>>>>>>> } WHERE {}`, triple);
>>>>>>>
>>>>>>> Here, $change would be unbound. So you either need to insert that into
>>>>>>> the query string or pre-bind it:
>>>>>>>
>>>>>>>> graph.update(`
>>>>>>>> INSERT {
>>>>>>>> <${change.uri}> teamwork:added [
>>>>>>>
>>>>>>>> teamwork:object $object ;
>>>>>>>> teamwork:predicate $predicate ;
>>>>>>>> teamwork:subject $subject ;
>>>>>>>> ]
>>>>>>>> } WHERE {}`, triple);
>>>>>>>
>>>>>>>
>>>>>>> HTH
>>>>>>> Holger
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>>> });
>>>>>>>> });
>>>>>>>> });
>>>>>>>>
>>>>>>>> return orphans; // Return the list of orphans after processing
>>>>>>>> });
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> it shows result in the change history but nothing gets added, the
>>>>>>>> change is empty.
>>>>>>>>
>>>>>>>> Could you have a look and let me know what should be changed ?
>>>>>>>>
>>>>>>>>
>>>>>>>> Thank you,
>>>>>>>>
>>>>>>>> Kasia
>>>>>>>> On Friday, January 5, 2024 at 10:53:11 AM UTC+1 Holger Knublauch wrote:
>>>>>>>>> To get instances of a class and its subclasses, use this trick from
>>>>>>>>> further below,
>>>>>>>>>
>>>>>>>>>>>>> SELECT ?instance
>>>>>>>>>>>>> WHERE {
>>>>>>>>>>>>> ?instance rdf:type/rdfs:subClassOf* ex:SomeClass .
>>>>>>>>>>>>> }
>>>>>>>>>
>>>>>>>>> This can also be rewritten as
>>>>>>>>>
>>>>>>>>> SELECT ?instance
>>>>>>>>> WHERE {
>>>>>>>>> ?type rdfs:subClassOf* ex:SomeClass .
>>>>>>>>> ?instance a ?type .
>>>>>>>>> }
>>>>>>>>>
>>>>>>>>> Holger
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>> On 5 Jan 2024, at 9:32 am, Kasia Kryczka <sparql...@ <>gmail.com
>>>>>>>>>> <http://gmail.com/>> wrote:
>>>>>>>>>>
>>>>>>>>>
>>>>>>>>>> Hi Holger,
>>>>>>>>>>
>>>>>>>>>> ok, but this still doesn't give me everything I need. I get like a
>>>>>>>>>> part of all the results from imports. Unfortynately I cannot post
>>>>>>>>>> pictures.
>>>>>>>>>> My ontology has owl:imports <http://datashapes.org/graphql> ;
>>>>>>>>>> owl:imports <http://topbraid.org/teamworkconstraints> ;
>>>>>>>>>> owl:imports <urn:x-evn-master:ontology_1> ;
>>>>>>>>>> owl:imports <urn:x-evn-master:ontology_2> ;
>>>>>>>>>> owl:imports <urn:x-evn-master: ontology_3 > ;
>>>>>>>>>> owl:imports <urn:x-evn-master: taxonomy_1> ;
>>>>>>>>>> owl:imports <urn:x-evn-master: ontology_4 > ;
>>>>>>>>>>
>>>>>>>>>> in the class hierarchy I can see more objects sth like that :
>>>>>>>>>>
>>>>>>>>>> Data Object
>>>>>>>>>> - Abstract Object
>>>>>>>>>> - Level 2 Object
>>>>>>>>>> -Level 3 Object
>>>>>>>>>> -Level 2 Object
>>>>>>>>>> - Conceptual Object
>>>>>>>>>> - Level 2 Object
>>>>>>>>>> -Level 3 Object
>>>>>>>>>> -Level 2 Object etc.
>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>> and all of them are from imports there are only 3 which are locally
>>>>>>>>>> defined.
>>>>>>>>>> I would like to get all with a sparql query if that's possible.
>>>>>>>>>> Hope this clarifies a bit.
>>>>>>>>>>
>>>>>>>>>> Br,
>>>>>>>>>>
>>>>>>>>>> Kasia
>>>>>>>>>> On Friday, January 5, 2024 at 9:05:47 AM UTC+1 Holger Knublauch
>>>>>>>>>> wrote:
>>>>>>>>>>> In ADS you can write
>>>>>>>>>>>
>>>>>>>>>>> let instances =
>>>>>>>>>>> graph.withDataGraph(dataset.withImports('urn:x-evn-master:geo'), ()
>>>>>>>>>>> =>
>>>>>>>>>>> graph.select(`
>>>>>>>>>>> SELECT ?instance
>>>>>>>>>>> WHERE {
>>>>>>>>>>> ?instance a skos:Concept .
>>>>>>>>>>> }
>>>>>>>>>>> `))
>>>>>>>>>>> instances.bindings
>>>>>>>>>>>
>>>>>>>>>>> Holger
>>>>>>>>>>>
>>>>>>>>>>>
>>>>>>>>>>>> On 5 Jan 2024, at 8:46 am, Kasia Kryczka <sparql...@ <>gmail.com
>>>>>>>>>>>> <http://gmail.com/>> wrote:
>>>>>>>>>>>>
>>>>>>>>>>>
>>>>>>>>>>>> Hi Holger,
>>>>>>>>>>>>
>>>>>>>>>>>> thank you for quick reply.
>>>>>>>>>>>> The thing is I don't want to use the include imports checkbox. I
>>>>>>>>>>>> want to have a query which I can later use in ADS.
>>>>>>>>>>>> Br,
>>>>>>>>>>>>
>>>>>>>>>>>> Kasia
>>>>>>>>>>>>
>>>>>>>>>>>>
>>>>>>>>>>>> On Thursday, January 4, 2024 at 4:02:09 PM UTC+1 Holger Knublauch
>>>>>>>>>>>> wrote:
>>>>>>>>>>>>> Are you using the SPARQL endpoint? Then activate the Include
>>>>>>>>>>>>> Imports checkbox.
>>>>>>>>>>>>>
>>>>>>>>>>>>> From the SPARQL query panel, it would be something like
>>>>>>>>>>>>>
>>>>>>>>>>>>> SELECT ?instance
>>>>>>>>>>>>> WHERE {
>>>>>>>>>>>>> ?instance rdf:type/rdfs:subClassOf* ex:SomeClass .
>>>>>>>>>>>>> }
>>>>>>>>>>>>>
>>>>>>>>>>>>> which would also get the instances of the subclasses of the given
>>>>>>>>>>>>> class.
>>>>>>>>>>>>>
>>>>>>>>>>>>> Holger
>>>>>>>>>>>>>
>>>>>>>>>>>>>
>>>>>>>>>>>>>
>>>>>>>>>>>>>
>>>>>>>>>>>>>> On 4 Jan 2024, at 3:52 pm, Kasia Kryczka <sparql...@ <>gmail.com
>>>>>>>>>>>>>> <http://gmail.com/>> wrote:
>>>>>>>>>>>>>>
>>>>>>>>>>>>>
>>>>>>>>>>>>>> Hi,
>>>>>>>>>>>>>>
>>>>>>>>>>>>>> This might be a simple question but I got stuck.
>>>>>>>>>>>>>>
>>>>>>>>>>>>>> I want to get all object from an ontology which are of a
>>>>>>>>>>>>>> owl:Class but which are also defined in all the includes of that
>>>>>>>>>>>>>> particular ontology.
>>>>>>>>>>>>>>
>>>>>>>>>>>>>> Any help would be great.
>>>>>>>>>>>>>>
>>>>>>>>>>>>>> Thanks,
>>>>>>>>>>>>>>
>>>>>>>>>>>>>> Kasia
>>>>>>>>>>>>>>
>>>>>>>>>>>>>>
>>>>>>>>>>>>>>
>>>>>>>>>>>>>
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>>>>>>>>>>>>>
>>>>>>>>>>>>
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>>>>>>>>>>>
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>>>>>>>>>
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