Hi Christopher,
thanks for the report and the nice steps to reproduce.
I can absolutely confirm your finding.

I checked up to latest dnsmasq as it is in the current development release 
(Artful).
That is 2.77 from 01-Jun-2017 so really not too old :-)

I appreciate the quality of this bug report and I'm sure it'll be
helpful to others experiencing the same issue. But I checked and neither
Ubuntu nor Debian have any patches on top of upstream dnsmasq.

Thereby this sounds like an upstream bug to me. The best route to
getting it fixed in Ubuntu (and actually everywhere) in this case would
be to file an upstream bug if you're able to do that.

If you do end up filing an upstream bug, please link to it from here -
that would be awesome. Thanks in advance!

** Changed in: dnsmasq (Ubuntu)
       Status: New => Confirmed

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https://bugs.launchpad.net/bugs/1702726

Title:
  dnsmasq fails when the ARP cache is full

Status in dnsmasq package in Ubuntu:
  Confirmed

Bug description:
  Test setup:
  OS: Ubuntu 16.04
  Hardware: D15_v2 VM on Azure

  Steps to reproduce:
  1) sudo apt-get install dnsmasq
  2) sudo sysctl -w net.ipv4.neigh.default.gc_thresh1=1
  3) sudo sysctl -w net.ipv4.neigh.default.gc_thresh2=1
  4) sudo sysctl -w net.ipv4.neigh.default.gc_thresh3=1
  5) dig @127.0.0.1 google.com

  Result: 
  ~$ dig @127.0.0.1 google.com
  ../../../../lib/isc/unix/socket.c:2104: internal_send: 127.0.0.1#53: Invalid 
argument
  ../../../../lib/isc/unix/socket.c:2104: internal_send: 127.0.0.1#53: Invalid 
argument
  ../../../../lib/isc/unix/socket.c:2104: internal_send: 127.0.0.1#53: Invalid 
argument

  ; <<>> DiG 9.10.3-P4-Ubuntu <<>> @127.0.0.1 google.com
  ; (1 server found)
  ;; global options: +cmd
  ;; connection timed out; no servers could be reached 

  However, an external DNS server still works fine (dig @8.8.8.8
  google.com, for example).

  We discovered this as the default max ARP cache size is 1024, and
  we're running a large cluster with a lot of intra-cluster network
  traffic. Increasing the size of the ARP cache solves this problem, but
  it seems like dnsmasq should still work and just be slow, like other
  applications (curl for example just takes longer to connect)

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