Yes, I killed the process because it hangs indefinitely there. The last
minibuffer msg is:
"Tramp: Decoding local file '/tmp....' with 'base64-decode-region'

Yes the chown operation is successful on the local cygwin host. (But not on
the remote, if that matters.)

As mentioned, the other non-plink modes seem to work fine. Here's the debug
output when using ssh mode to read the same file that fails using plink:
debug_tramp_ssh.gz
<http://emacs.1067599.n5.nabble.com/file/n359909/debug_tramp_ssh.gz>  

The 2.2.12-pre tests now look good on the latest Cygwin emacs.

    Ran 42 tests, 42 results as expected (2015-05-31 19:10:21-0400)
    2 expected failures




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