Actually is more a "lack of reference". I have read a little about both (homepages of each, forums, wiki, etc) and while founding several references about shred being unsafe in journaling systems, I found none in the nautilus wipe. I am not deying that it might also not be 100% safe, but still, I think nautilus wipe has still the advantage of giving you a menu option instead of relying on command line only. And, in the method I described above, I use its ability to wipe free space so that the software recover tools have less a chance of finding "remains" of the file. As to speed, I haven't used shred in quite some time now, so I can't really compare. But I would say that securely wiping a file is never a fast process.

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