Ok, this might be a bug, otoh I might have broken something.
Anyway, I believe that the line:
visit_key = column(String, # foreign_key="visit.visit_key",
primary_key=True)
In model.py if you use sqlalchemy with identity on should read:
visit_key = column(String(40), # foreign_key="visit.visit_key",
primary_key=True)
In order for it to work with mysql 5.
If this has already been fixed I apologize.
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