On Thu, Oct 8, 2009 at 4:23 PM, Christopher Arndt <[email protected]>wrote:

>
> Dan schrieb:
> > Now the same thing from within the virtualenv:
> >
> > ImportError: No module named Bio
> >
> > I tried loading the Bio package using 'easy_install biopython,' which
> > looks like it worked just fine, but python still has no luck finding
> > the Bio package within the virtual environment.
> >
> > Must be another step I'm missing somewhere.  Any ideas?
>
> Did you activate the virtual environment?
>
>    source /path/to/env/bin/activate
>
> You have to do this before you install anything in the virtual
> environment with easy_install.
>
> If you just want to use the virtual env for running python, it is enough
> to run the python executable from the "bin" directory of the virtual
> env, e.g. /path/to/env/bin/python <yourscript>, but it's usually easier
> to just do the "source" comamdn given above before you begin your work.
>
> See http://pypi.python.org/pypi/virtualenv for details.
>
> Chris
>
>
Turns out what was killing access to the Bio package was the
"--no-site-packages" parameter that was added to the  virtualenv command per
the install directions.  Once I omitted this parameter I was able to get the
job done.  This may not isolate the environment as well, but it works and
I'm proceeding with the project.

Thanks for your help.
Dan

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