On Fri, Oct 9, 2009 at 12:12 PM, Christopher Arndt <[email protected]>wrote:
>
> Dan Arbogast schrieb:
> > This was a newly quickstarted TG1.1 project I created yesterday, so I
> > don't think the issue has successfully been resolved from a quickstart
> > standpoint.
>
> Then please give the full error output and and the output of "tg-admin
> info" when run in your project directory.
>
>
> Chris
>
Here is the "tg-admin info" output:
/usr/bin/tg-admin:5: UserWarning: Unbuilt egg for ClientCookie [unknown
version] (/usr/lib/python2.5/site-packages)
from pkg_resources import load_entry_point
TurboGears Complete Version Information
TurboGears requires:
* TurboGears 1.1
* tgMochiKit 1.4.2beta1
* TurboJson 1.2.1
* simplejson 2.0.9
* setuptools 0.6c9
* PEAK-Rules 0.5a1.dev-r2600
* PasteScript 1.7.3
* Genshi 0.5.1
* FormEncode 1.2.2
* configobj 4.4.0
* CherryPy 2.3.0
* prioritized-methods 0.2.1
* Extremes 1.1.1
* AddOns 0.7
* DecoratorTools 1.7
* BytecodeAssembler 0.5.1
* Cheetah 2.0.1
* PasteDeploy 1.3.2
* Paste 1.6
* PEAK-Rules 0.5a1.dev-r2600
* DecoratorTools 1.7
* SymbolType 1.0
* DecoratorTools 1.7
Toolbox Gadgets
* info (TurboGears 1.1)
* catwalk (TurboGears 1.1)
* shell (TurboGears 1.1)
* designer (TurboGears 1.1)
* widgets (TurboGears 1.1)
* admi18n (TurboGears 1.1)
Identity Providers
* sqlobject (TurboGears 1.1)
* sqlalchemy (TurboGears 1.1)
tg-admin Commands
* info (TurboGears 1.1)
* shell (TurboGears 1.1)
* quickstart (TurboGears 1.1)
* update (TurboGears 1.1)
* sql (TurboGears 1.1)
* i18n (TurboGears 1.1)
* toolbox (TurboGears 1.1)
Visit Managers
* sqlobject (TurboGears 1.1)
* sqlalchemy (TurboGears 1.1)
Template Engines
* json (TurboJson 1.2.1)
* genshi-markup (Genshi 0.5.1)
* genshi-text (Genshi 0.5.1)
* genshi (Genshi 0.5.1)
Widget Packages
* tgmochikit (tgMochiKit 1.4.2beta1)
TurboGears Extensions
* visit (TurboGears 1.1)
* identity (TurboGears 1.1)
And here is the error output:
Page handler: <bound method Root.miRNA of <oligo.controllers.Root
object at 0xa447c8c>>
Traceback (most recent call last):
File
"/home/darbogast/python/oligo_1.1/env/lib/python2.5/site-packages/CherryPy-2.3.0-py2.5.egg/cherrypy/_cphttptools.py",
line 121, in _run
self.main()
File
"/home/darbogast/python/oligo_1.1/env/lib/python2.5/site-packages/CherryPy-2.3.0-py2.5.egg/cherrypy/_cphttptools.py",
line 264, in main
body = page_handler(*virtual_path, **self.params)
File "<string>", line 3, in miRNA
File
"/home/darbogast/python/oligo_1.1/env/lib/python2.5/site-packages/TurboGears-1.1-py2.5.egg/turbogears/controllers.py",
line 356, in expose
*args, **kw)
File "<generated code>", line 0, in run_with_transaction
File "build/bdist.linux-i686/egg/peak/rules/core.py", line 153, in __call__
return self.body(*args, **kw)
File
"/home/darbogast/python/oligo_1.1/env/lib/python2.5/site-packages/TurboGears-1.1-py2.5.egg/turbogears/database.py",
line 404, in so_rwt
retval = func(*args, **kw)
File "<generated code>", line 0, in _expose
File "build/bdist.linux-i686/egg/peak/rules/core.py", line 153, in __call__
return self.body(*args, **kw)
File
"/home/darbogast/python/oligo_1.1/env/lib/python2.5/site-packages/TurboGears-1.1-py2.5.egg/turbogears/controllers.py",
line 385, in <lambda>
fragment, options, args, kw)))
File
"/home/darbogast/python/oligo_1.1/env/lib/python2.5/site-packages/TurboGears-1.1-py2.5.egg/turbogears/controllers.py",
line 420, in _execute_func
output = errorhandling.try_call(func, *args, **kw)
File
"/home/darbogast/python/oligo_1.1/env/lib/python2.5/site-packages/TurboGears-1.1-py2.5.egg/turbogears/errorhandling.py",
line 73, in try_call
return func(self, *args, **kw)
File "<string>", line 3, in miRNA
File
"/home/darbogast/python/oligo_1.1/env/lib/python2.5/site-packages/TurboGears-1.1-py2.5.egg/turbogears/identity/conditions.py",
line 247, in require
return fn(self, *args, **kwargs)
File "/home/darbogast/python/oligo_1.1/oligo/oligo/controllers.py",
line 230, in miRNA
miRNA = MiRBase(data, False)
File "/home/darbogast/python/oligo_1.1/oligo/oligo/miRBase.py", line
51, in __init__
if self.parseDatFile(linecollection, searchItem):
File "/home/darbogast/python/oligo_1.1/oligo/oligo/miRBase.py", line
152, in parseDatFile
self.foldCreate(self.sequence)
File "/home/darbogast/python/oligo_1.1/oligo/oligo/miRBase.py", line
202, in foldCreate
result = commands.getstatusoutput(cmmnd)
AttributeError: 'module' object has no attribute 'getstatusoutput'
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