On Dec 31, 2013 12:43 PM, "Protas, Meredith" <[email protected]> wrote: > > Thanks for all of your comments! I am working with human genome information which is in the form of many very short DNA sequence reads. I am using a script that sorts through all of these sequences and picks out ones that contain a particular sequence I'm interested in. Because my data set is so big, I have the data on an external hard drive (but that's where I had it before when it was faster too).
Meredith, you really haven't given enough information for anyone to know what your program does and why it's slow. How long is your code? If you could just post the code here then you will likely get a much more helpful response. Oscar
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