On 23Jul2017 00:20, Alan Gauld <alan.ga...@yahoo.co.uk> wrote:
On 22/07/17 19:14, Winonah Ojanen wrote:
using python with anaconda in jupiter notebook. However, I am having
Usual caveat: The tutor list is targeted at the standard library
so any help for non standard library modules is best sought from
the library support fora. In this case that includes the SciPy forum
and any illustris one.
Though arguably the OP's problem is an import issue, not really module
specific.
That having been said, I'll take a guess...
$ mkdir Illustris-3
$ mkdir Illustris-3/groups_135
Are these folders in your PYTHONPATH? If not Python will not find them.
import illustris_python as il
---------------------------------------------------------------------------
ModuleNotFoundError Traceback (most recent call last)
The OP cded into the new dir; I'd normally expect things to be found if the
module was a local file/dir. However...
For some reason the computer is not recognizing this as a file on my
computer. The CCA folks says this is a coding problem and not an illustris
problem. any ideas to get me past this? I may also need help getting
farther into the download process.
I just ran the OP's download command:
wget -nd -nc -nv -e robots=off -l 1 -r -A hdf5 --content-disposition --header="API-Key:
d522db2e1b33e36d3b365cc9ac1c2c5d"
"http://www.illustris-project.org/api/Illustris-3/files/groupcat-135/?format=api";
This doesn't seem to download any Python code at all. It does get a couple of
HDF files, presumably with data to work with.
So the issue is initially that the module isn't present anywhere. Looking at
the instructions cited <http://www.illustris-project.org/data/docs/scripts/>,
they only cover fetching som data and working; they presume the software is
already present. I don't immediately see actual software installation
instructions, and it is not presented in PyPI.
Most like the OP will have to install the software directly from:
https://bitbucket.org/illustris/illustris_python
This command:
hg clone https://bitbucket.org/illustris/stris_pythonillustris_python
should produce an "illustris_python" in the current directory, and then her
import command will find it.
However, there are other prerequisites. This pip command:
pip install h5py numpy
seems to resolve them. The OP will need to use Python 2 because the module
seems to rely on a relative import (for its "util.py" file).
Cheers,
Cameron Simpson <c...@zip.com.au>
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