Application deadline: December 31st, 2008.

The Functional Genomics laboratory (http://functionalgenomics.upf.edu)
at the Pompeu Fabra University is seeking highly motivated candidates
for a PhD position funded by the Research Staff Training (FPI) program
of the Spanish Ministry of Science and Innovation through the project
"Machine learning of graphical Markov models through qp-graphs:
application to molecular regulatory network modeling"
(ref. TIN2008-00556/TIN).

This project aims at extending a statistical tool introduced by our
group, the qp-graph [1], which we have successfully applied to
steady-state microarray data [2], to enable its application to
time-course microarray data. We are, therefore, searching candidates
graduated in Statistics, Mathematics, Computer Science or Engineering,
with a solid background on basic concepts of machine learning,
multivariate statistics and graph theory, intellectual curiosity for
questions in the field of life sciences, a big appetite for applying
computational approaches to solve problems outside their own field and a
high degree of motivation for science and research. Eligible candidates
should also add up at least 300 ECTS in their graduate and post-graduate
academic record by the end of the current academic year.

The Functional Genomics Laboratory is part of the Computational Genomics
group (http://genomics.upf.edu) within the Biomedical Informatics
Research Unit (http://grib.upf.edu) that belongs to the Department of
Experimental and Health Sciences (DCEXS) at the Pompeu Fabra University
(http://www.upf.edu), and to the Municipal Institute for Medical
Research (http://www.imim.es), both located at the Barcelona Biomedical
Research Park (http://www.prbb.org) that joins together more than 1000
researchers from different public research institutions in the life
sciences and which was recently featured in Nature (vol. 454:248-249,
2008) as one of the thriving science parks that are making Barcelona to
surge ahead as a Mediterranean science hub.

Please send a complete Curriculum Vitae, including academic record, to
[EMAIL PROTECTED] jointly with the email address of at least one
person who may be asked for reference on the application, no later than
December 31st, 2008.


Related publications:

1. Castelo R and Roverato A. A robust procedure for Gaussian graphical
model search from microarray data with p larger than n. Journal of
Machine Learning Research, 7:2621-2650, 2006.

2. Castelo R and Roverato A. Reverse engineering molecular regulatory
networks from microarray data with qp-graphs. Journal of Computational
Biology, in press.

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