I am not seeing this issue at my end. I think it is related to compiz,
so have a look at the settings in CompizConfig Settings Manager,
especially in General Options and Place Windows, and see if the options
are at the default setting.
This is not happening when compiz is disabled, right?
//magnus
** Also affects: compiz (Ubuntu)
Importance: Undecided
Status: New
** Changed in: compiz (Ubuntu)
Status: New => Incomplete
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Pidgin group chooser with compiz : not the right location
https://bugs.launchpad.net/bugs/305925
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