I also have the same problem, and at least mine seem tied to
flashplugin-nonfree.

If I remove flashplugin, firefox runs fine under maximum cpu-load. (regardless 
of if it's nice:d or not)
If I have flashplugin installed, firefox is very laggy under max cpu-load, but 
only if the program that generates cpu uses nice.

./maxcpu contains "while true; do true; done"
If I run "./maxcpu" or "nice -n 1 ./maxcpu" then firefox is still quite 
responsive.
If I run "nice ./maxcpu" or "nice -n 19 ./maxcpu" then firefox is unusable, 
just showing my bookmarks when I click bookmarks from the menu can take like 
20s.

Tests are run with loads of tabs and junk..

I'd try the old flashplugin-nonfree/edgy (which I think will work
nicely) but it doesn't seem to install correctly any more. My current
version is 9.0.21.78.2ubuntu1~edgy1 from edgy-backports/multiverse.

-- 
Firefox unresponsive when CPU is occupied 100% with a low priority process
https://launchpad.net/bugs/68791

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