I ran into this same problem with Intrepid, fresh install from the live
CD.  Looking in "Add/Remove Programs", I can find a given program.  Yet,
when using quick search in Synaptic and regular search, I only see
installed packages.  In a previous install, this problem went away after
I installed some community-supported software.  I have since done a new
fresh install and again saw the problem.

The "sudo update-apt-xapian-index" command fixed this issue for me,
also.

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[Intrepid] Synaptic unusable - Can not find packages
https://bugs.launchpad.net/bugs/288797
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