I'm not sure I get what the issue is... and how it relates to the daily
autocommits feature.
Yes, some files in /etc get updated by the system and that will appear
in the etckeeper history. But how can the tree be out of date when you
run a commit ? That supposes you originally checked it out from
somewhere else ? If not, how did you first initialize your repository ?
** Changed in: etckeeper (Ubuntu)
Status: New => Incomplete
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Daily autocommits lead to frequent conflicts
https://bugs.launchpad.net/bugs/340726
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