Further messing about shows that if I forcibly chmod extended_states to
allow a+rw then all seems well.

This bug seems to be that if aptitude is run as root from the command
line, it creates extended_states in such a way that update-manager
cannot access it.

-- 
[feisty] [apt] command line apt-get/aptitude breaks update-manager
https://launchpad.net/bugs/74190

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