I can confirm this bug in Ubuntu 9.04 (my first steps with Gnome after
several years of KDE).


======= works =============
edu...@nb-ewulff:~$ gksudo -d nautilus

No ask_pass set, using default!
xauth: /tmp/libgksu-u3Ectl/.Xauthority
STARTUP_ID: gksudo/nautilus/16567-0-nb-ewulff_TIME10844278
cmd[0]: /usr/bin/sudo
cmd[1]: -H
cmd[2]: -S
cmd[3]: -p
cmd[4]: GNOME_SUDO_PASS
cmd[5]: -u
cmd[6]: root
cmd[7]: --
cmd[8]: nautilus
buffer: --
brute force GNOME_SUDO_PASS ended...
No password prompt found; we'll assume we don't need a password.
xauth: /tmp/libgksu-u3Ectl/.Xauthority
xauth_env: /home/eduard/.Xauthority
dir: /tmp/libgksu-u3Ectl

======= does not =============
edu...@nb-ewulff:~$ gksudo -d -u palo nautilus

No ask_pass set, using default!
xauth: /tmp/libgksu-tYOcES/.Xauthority
STARTUP_ID: gksudo/nautilus/16570-0-nb-ewulff_TIME10864983
cmd[0]: /usr/bin/sudo
cmd[1]: -H
cmd[2]: -S
cmd[3]: -p
cmd[4]: GNOME_SUDO_PASS
cmd[5]: -u
cmd[6]: palo
cmd[7]: --
cmd[8]: nautilus
buffer: -No protocol specified-
brute force GNOME_SUDO_PASS ended...
No password prompt found; we'll assume we don't need a password.
No protocol specifiedCould not parse arguments: Anzeige kann nicht geƶffnet 
werden:
xauth: /tmp/libgksu-tYOcES/.Xauthority
xauth_env: /home/eduard/.Xauthority
dir: /tmp/libgksu-tYOcES

The last case is what I want. I can login as user palo but switching
between whole sessions is not my intention.

-- 
gksuexec doesn't work in dapper !
https://bugs.launchpad.net/bugs/47388
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