I'm also seeing this issue, Karmic, but I presume issue is general.
Threw question out in #ubuntu chat, two answers, both affirmative > confirming.

Window gets sent to background but retains focus. Opposed to behaviour
in metacity where focus is transfered as well.

** Changed in: compiz (Ubuntu)
       Status: Incomplete => Confirmed

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middle click titlebar → the window loses focused
https://bugs.launchpad.net/bugs/122507
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