I ended up in a similar situation with a logical partition inexplicably
listed as primary instead, which was preventing me testing Wubi. No idea
how that happened, the only things that should have touched the
partition table on that disk are gparted and WinXP's installer.

Anyway, for anybody stumbling across this bug report, TestDisk did a
nice job of fixing the mess, though in the interests of paranoia I'd
recommend saving the output of sfdisk (with -d and -d -x) before, and
comparing with the results after, just to make sure it looks sane..

http://www.cgsecurity.org/wiki/TestDisk


I'd agree that silently pretending a screwed up ptable is empty is fairly evil. 
A simple dialog to say "I don't understand what's on this disk, bailing out" 
would be enough ..

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Cannot have overlapping partitions
https://bugs.launchpad.net/bugs/103794
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