Found the problem:

Ubuntu installer mounts any existing swap partition upon boot - in my
case /dev/sda6.

The active swap partition prevents the kernel from rereading the
partition table after the installer modified it.


Workaround:

Before starting installation change to text console via ALT+CTRL+F2 and
type in:

sudo bash
swapoff -a

Change back to the installer via ALT+CTRL+F7 and continue installation.

Suggested fix:

Deactivate all active swap partitions before manipulating the partition
table.

BUT: the main problem remains: the installer should not make changed to
the partition table in the first place if i don't change any partitions
as explained above in comment #4

Ubuntu 9.10 Netbook Remix installing right now...

-- 
Installer fails to format partition
https://bugs.launchpad.net/bugs/365702
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