I think I've tracked it down a little further.

It seems that only X freezes not the system as a whole. I was able to
trigger this bug from a remote computer via ssh and gather the logs
afterwards. Here's what I did:

$ ssh [email protected]
$ export DISPLAY=:0.0
$ export XAUTHORITY=/var/run/gdm/auth-for-login-*/database
$ xrandr -q
Screen 0: minimum 320 x 200, current 1366 x 768, maximum 4096 x 4096
VGA1 disconnected (normal left inverted right x axis y axis)        
LVDS1 connected 1366x768+0+0 (normal left inverted right x axis y axis) 0mm x 
0mm
   1366x768       59.9*+                                                        
 
   1360x768       59.8                                                          
 
   1024x768       85.0     75.0     70.1     60.0                               
 
   832x624        74.6                                                          
 
   800x600        85.1     72.2     75.0     60.3     56.2                      
 
   640x480        85.0     72.8     75.0     59.9                               
 
   720x400        85.0                                                          
 
   640x400        85.1                                                          
 
   640x350        85.1

now I plugged in the other display

$ xrandr -q
Screen 0: minimum 320 x 200, current 1366 x 768, maximum 4096 x 4096
VGA1 connected 1280x1024+1366+0 (normal left inverted right x axis y axis) 
338mm x 270mm
   1280x1024      60.0*+   75.0
   1152x864       75.0
   1024x768       75.1     70.1     60.0
   832x624        74.6
   800x600        72.2     75.0     60.3     56.2
   640x480        72.8     75.0     60.0
   720x400        70.1
LVDS1 connected 1366x768+0+0 (normal left inverted right x axis y axis) 0mm x 
0mm
   1366x768       59.9*+
   1360x768       59.8
   1024x768       85.0     75.0     70.1     60.0
   832x624        74.6
   800x600        85.1     72.2     75.0     60.3     56.2
   640x480        85.0     72.8     75.0     59.9
   720x400        85.0
   640x400        85.1
   640x350        85.1

At the moment I issued this command the screens went blank (except the pointer) 
as before with gnome-display-settings.
Successive calls to xrandr -q simply block until I hit ctrl+c.

I attached the output of dmesg and Xorg.0.log.
In dmesg 2495 is the time of the first "xrandr -q" 3974 the second one.

I hope this get's us a bit

** Attachment added: "Xorg.0.log"
   http://launchpadlibrarian.net/35319441/Xorg.0.log

-- 
Ubuntu freezes when opening gnome-display-properties with multiple displays
https://bugs.launchpad.net/bugs/466539
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