I wasn't getting this error on a clean install of Karmic, so I started
comparing my original karmic install, which was upgraded from Jaunty,
and a clean install.  What I found was that I had not yet installed the
hdapsd package on the clean install.  From testing, I reproduced that if
I stop hdapsd, the problem cannot be reproduced, and upon starting
hdaps, the problem is easily reproduced.

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Multiple GUI apps freezing with high I/O wait during typing
https://bugs.launchpad.net/bugs/417041
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