Note: this is only temporary, but I think most people would do this
rather than wait for a new kernel

Windows XP has a utility called "convert" that can convert a FAT or FAT32 drive 
into NTFS
my drive was originally FAT32, and these are the EXACT steps I took:
1) uninstall Ubuntu (which you attempted to install with Wubi)
2) open the Command Prompt (look for it in the Start Menu)
3) type:
convert c: /fs:ntfs
replacing c with the approproate drive letter if necessary
4) wait until you see the message "Conversion Complete"
5) reinstall Wubi as normal

-- 
installing ubuntu stoped on "installing system" on 0% without any progress for 
half an hour 
https://bugs.launchpad.net/bugs/376120
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