I've experienced a similar error if 2 instances of gpg-agent is running.
in this case, the other instance 'blocked' pcscd so that the new
instance starts, but fails with the above error.
can you confirm that no other application is blocking pcscd?
** Changed in: gnupg2 (Ubuntu)
Status: New => Incomplete
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GnuPG Smart Card Support broken
https://bugs.launchpad.net/bugs/368392
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