Could this line be added just before apt-config is used to get the proxy
settings from the apt configuration?
apt_conf_proxy=$(test -r /etc/environment && . /etc/environment ; echo
"${http_proxy}")
This should fall back on proxy settings from the environment, unless
overridden by the apt configuration.
--
/etc/cron.daily/apt incorrectly overrides apt.conf proxy settings with GNOME
proxy settings, losing proxy exclusion list, and causes updates to fail
https://bugs.launchpad.net/bugs/277493
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