I ran into this today. The reason why /etc/modprobe.d/ gets ignored is
because usbhid is loaded from the initramfs before the rootfs is
mounted. You must rebuild the initramfs to include your modified options
like this:

sudo update-initramfs -k all -u

Installing a kernel update will also do this so perhaps reporter changed
the options before applying updates, causing the problem to appear to
fix itself. Or perhaps the problem way back then was totally different.
Anyway, I post ths solution for the next person who has this problem.

-- 
options usbhid mousepoll=x ignored
https://bugs.launchpad.net/bugs/121356
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