I have a related issue:

Every now and then my left mouse button stops working. I have to reboot to 
solve the issue.
It occurs irregularly, that's the strange thing. I have no idea if it has to do 
with any key combination i press before it occurs.

Desktop effects are on.
@Rob Bednark, Did changing your Visual Effects settings help solve the problem?

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Desktop-Effects Bug. Left Mouse Click doesn't work.
https://bugs.launchpad.net/bugs/90918
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